Published results

Science, Nature Family and other TOP Publications

Kubiasová K, Montesinos JC, Šamajová O, Nisler J, Mik V, Semerádová H, Plíhalová L, Novák O, Marhavý P, Cavallari N, Zalabák D, Berka K, Doležal K, Galuszka P, Šamaj J, Strnad M, Benková E, Plíhal O, Spíchal L (2020) Cytokinin fluoroprobe reveals multiple sites of cytokinin perception at plasma membrane and endoplasmic reticulum. Nat. Commun. 11:4285; DOI:10.1038/s41467-020-17949-0

Antoniadi I, Novák O, Gelová Z, Johnson A, Plíhal O, Simerský R, Mik V, Vain T, Mateo-Bonmatí E, Karády M, Pernisová M, Plačková L, Opassathian K, Hejátko J, Robert S, Friml J, Doležal K, Ljung K, Turnbull C (2020) Cell-surface receptors enable perception of extracellular cytokinins. Nat. Commun. 11:4284; DOI:10.1038/s41467-020-17700-9

Zhang J, Mazur E, Balla J, Gallei M, Kalousek P, Medvedova Z, Li Y, Wang Y, Prat T, Vasileva M, Reinohl V, Prochazka S, Halouzka R, Tarkowski P, Luschnig C, Brewer PB, Friml J (2020) Strigolactones inhibit auxin feedback on PIN-dependent auxin transport canalization. Nat. Commun. 11:3508; DOI:10.1038/s41467-020-17252-y

Hiebert CW, Moscou MJ, Hewitt T, Steuernagel B, Hernandez-Pinzon I, Green P, Pujol V, Zhang P, Rouse MN, Jin Y, McIntosh RA, Upadhyaya N, Zhang JP, Bhavani S, Vrána J, Karafiátová M, Huang L, Fetch T, Doležel J, Wulff BBH, Lagudah E, Spielmeyer W (2020) Stem rust resistance in wheat is suppressed by a subunit of the mediator complex. Nat. Commun. 11:1123; DOI:10.1038/s41467-020-14937-2

Skokan R, Medvecká E, Viaene T, Vosolsobě S, Zwiewka M, Müller K, Skůpa P, Karady M, Zhang Y, Janacek DP, Hammes UZ, Ljung K, Nodzyński T, Petrášek J, Friml J (2019) PIN-driven auxin transport emerged early in streptophyte evolution. Nat. Plants 5, 1114-1119; DOI:10.1038/s41477-019-0542-5

Kreplak J, Madoui M-A, Cápal P, Novák P, Labadie K, Aubert G, Bayer PE, Gali KK, Syme RA, Main D, Klein A, Bérard A, Vrbová I, Fournier C, d’Agata L, Belser C, Berrabah W, Toegelová H, Milec Z, Vrána J, Lee HT, Kougbeadjo A, Térézol M, Huneau C, Turo CJ, Mohellibi N, Neumann P, Falque M, Gallardo K, McGee R, Tar’an B, Bendahmane A, Aury JM, Batley J, Le Paslier MC, Ellis N, Warkentin TD, Coyne CJ, Salse J, Edwards D, Lichtenzveig D, Macas J, Doležel J, Wincker P, Burstin J (2019) A reference genome for pea provides insight into legume genome evolution. Nat. Genet. 51, 1411-1422; DOI: 10.1038/s41588-019-0480-1

Pinnola A, Alboresi A, Nosek L, Semchonok D, Arshad R, Trotta A, Barozzi F, Kouřil R, Dall´Osto L, Aro EM, Boekema EJ, Bassi R (2018) A Lhcb9-dependent photosystem I megacomplex induced under low light in Physcomitrella patens. Nat. Plants 4, 910-919; DOI: 10.1038/s41477-018-0270-2

Robert HS, Park C, Gutierrez CL, Wojcikowska B, Pěnčík A, Novák O, Chen JY, Grunewald W, Dresselhaus T, Friml J, Laux T (2018) Maternal auxin supply contributes to early embryo patterning in Arabidopsis. Nat. Plants 4, 548-553; DOI: 10.1038/s41477-018-0204-z

The International Wheat Genome Sequencing Consortium incl. Doležel J, Bartoš J, Holušová K, Plíhal O, Abrouk M, Balcárková B, Šimková H, Toegelová H, Tulpová Z (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome, Science 361; DOI: 10.1126/science.aar7191

Ovečka M, von Wangenheim D, Tomančák P, Šamajová O, Komis G, Šamaj J (2018) Multiscale imaging of plant development by light-sheet fluorescence microscopy. Nat. Plants 4, 639-650; DOI:10.1038/s41477-018-0238-2

Panáček A, Kvítek L, Smékalová M, Večeřová R, Kolář M, Röderová M, Dyčka F, Šebela M, Prucek R, Tomanec O, Zbořil R (2018) Bacterial resistance to silver nanoparticles and a way how to overcome it. Nat. Nanotechnol. 13, 65-71; DOI: 10.1038/s41565-017-0013-y

Komis G, Šamajová O, Ovečka M, Šamaj J (2018) Cell and Developmental Biology of Plant Mitogen-Activated Protein Kinases. Annu. Rev. Plant Biol. 69, 237-265; DOI: 10.1146/annurev-arplant-042817-040314

Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang XQ, Zhang Q, Barrero RA, Li L, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, Vrána J, Chan S, Muñoz-Amatriaín M, Ounit R, Wanamaker S, Bolser D, Colmsee C, Schmutzer T, Aliyeva-Schnorr L, Grasso S, Tanskanen J, Chailyan, A., Sampath, D., Heavens, D., Clissold, L., Cao, S., Chapman, B., Dai, F., Han, Y., Li, H., Li, X, Lin C, McCooke JK, Tan C, Wang P, Wang S, Yin S, Zhou G, Poland JA, Bellgard MI, Borisjuk L, Houben A, Doležel J, Ayling S, Lonardi S, Kersey P, Langridge P, Muehlbauer GJ, Clark MD, Caccamo M, Schulman AH, Mayer KFX, Platzer M, Close TJ, Scholz U, Hansson M, Zhang G, Braumann I, Spannagl M, Li C, Waugh R, Stein N (2017) A chromosome conformation capture ordered sequence of the barley genome. Nature 5744, 427-433; DOI: 10.1038/nature22043

Van Bezouwen LS, Caffarri S, Kale RS, Kouřil R, Thunnissen AMWH, Oostergetel GT, Boekema EJ (2017) Subunit and chlorophyll organization of the plant photosystem II supercomplex. Nat. Plants 3, 17080; DOI: 10.1038/nplants.2017.80

Ovečka M, Vaškebová L, Komis G, Luptovčiak I, Smertenko A, Šamaj J (2015) Preparation of plants for developmental and cellular imaging by light-sheet microscopy, Nat. Protoc. 10, 1234-1247; DOI: 10.1038/nprot.2015.081

Komis G, Mistrik M, Šamajová O, Ovečka M, Bartek J, Šamaj J (2015) Superresolution live imaging of plant cells using structured illumination microscopy. Nat. Protoc. 10, 1248-1263; DOI:10.1038/nprot.2015.083

2020

Vilková M, Šoral M, Bečka M, Potočňák I, Sabolová D, Béres T, Dušek M, Imrich J (2020) 1H, 13C and 15N NMR of spiro acridines integrated with pyrrole scaffolds. Magnetic Resonance in Chemistry 58, 204-214; DOI:10.1002/mrc.4974

Rahim D, Kalousek P, Tahir N, Vyhnánek T, Tarkowski P, Trojan V, Abdulkhaleq D, Ameen AH, Havel L (2020) In Vitro Assessment of Kurdish Rice Genotypes in Response to PEG-Induced Drought Stress. Appl. Sci.10:4471; DOI:10.3390/app10134471

Šamec D, Ćavar Zeljković S (2020) Analytical methods focused on studying phytonutrients in food. In Phytonutrients in Food, 237-244 Woodhead Publishing; DOI:10.1016/B978-0-12-815354-3.00009-5

Kaczorová D, Béres T, Ćavar Zeljković S, Bjelková M, Kuchař M, Tarkowski P (2020) O konopí bez předsudků. Chemické listy 114, 277-284. http://www.chemicke-listy.cz/ojs3/index.php/chemicke-listy/article/view/3586

Halouzka R, Cavar Zeljkovic S, Klejdus B, Tarkowski P (2020) Analytical methods in strigolactone research. Plant Methods 16, 1-13; DOI:10.1186/s13007-020-00616-2

Jaworek P, Tarkowski P, Hluska T, Kouřil S, Vrobel O, Nisler J, Kopečný D (2020) Characterization of five CHASE-containing histidine kinase receptors from Populus × canadensis cv. Robusta sensing isoprenoid and aromatic cytokinins. Planta 251:1; DOI:10.1007/s00425-019-03297-x

Bednaříková M, Váczi P, Lazár D, Barták M (2020) Photosynthetic performance of Antarctic lichen Dermatocarpon polyphyllizum as affected by desiccation and low temperature. Photosynth. Res. 145, 159-177; DOI: 10.1007/s11120-020-00773-4

Stirbet A., Lazár D., Guo Y., Govndjee G. (2020) Photosynthesis: basics, history, and modeling. Ann. Bot., in press; DOI:10.1093/aob/mcz171

Baránková B, Lazár D, Nauš J, Solovchenko A, Gorelova O, Baulina O, Huber G, Nedbal L (2020) Light absorption and scattering by high light-tolerant, fast-growing Chlorella vulgaris IPPAS-C1 cells. Algal Res. 49, 101881; DOI:10.1016/j.algal.2020.101881

Bednaříková M, Folgar-Cameán Y, Kučerová Z, Lazár D, Špundová M, Hájek J, Barták M (2020) Analysis of K and L band appearance in OJIPs in Antarctic lichens in low and high temperature. Photosynthetica 58(SI), 646-656; DOI:10.32615/ps.2019.180

Prasad A, Gouripeddi P, Devireddy HNR, Ovsii A, Rachakonada DP, Wijk RV, Pospíšil P (2020) Spectral distribution of ultra-weak photon emission as a response to wounding in plants: an in vivo study. Biology 6, 139; DOI:10.3390/biology9060139

Capó-Bauçà S, Font-Carrascosa M, Ribas-Carbó M, Pavlovič A, Galmés J (2020) Biochemical and mesophyll diffusional limits to photosynthesis are determined by prey and root nutrient uptake in the carnivorous pitcher plant Nepenthes × ventrata. Ann. Bot. 126, 25-37; DOI:10.1093/aob/mcaa041

Kocáb O, Jakšová J, Novák O, Petřík I, Lenobel R, Chamrád I, Pavlovič A (2020) Jasmonate-independent regulation of digestive enzyme activity in the carnivorous butterwort Pinguicula × Tina. J. Exp. Bot. 71, 3749–3758; DOI:10.1093/jxb/eraa159

Dabravolski SA, Kavalionak YK (2020) Effect of corn lectins on the intestinal transport of trace elements. J. Consum. Prot. Food Saf. 15, 163-170; DOI:10.1007/s00003-019-01261-1

Hensel G (2020) Genetic transformation of Triticeae cereals - Summary of almost three-decade's development. Biotechnol. Adv. 40:107484; DOI:10.1016/j.biotechadv.2019.107484

Slepčíková P, Potočňák I, Béres T, Jáger D, Imrich J, Vilková M (2020) Full NMR assignment of new acridinyl-chalcones, pyrazolino-acridines, and spiro[imidazo[1,5-b]pyrazole-4,9 '-acridines]. Magn. Reson. Chem., in press; DOI:10.1002/mrc.5028

Chandler JO, Haas FB, Khan S, Bowden L, Ignatz M, Enfissi EMA, Gawthrop F, Griffiths A, Fraser PD, Rensing SA, Leubner-Metzger G (2020) Rocket Science: The Effect of Spaceflight on Germination Physiology, Ageing, and Transcriptome of Eruca sativa Seeds. Life 10, 49; DOI:10.3390/life10040049

Karalija E, Zeljković Ćavar S, Parić A (2020) Harvest time-related changes in biomass, phenolics and antioxidant potential in Knautia sarajevensis shoot cultures after elicitation with salicylic acid and yeast. In Vitro Cell. Dev. Biol.-Plant 56, 177-183; DOI:10.1007/s11627-019-10028-0

Dančák M, Hroneš M, Sochor M (2020) Thismia ornata and T. coronata (Thismiaceae), two new species from Sarawak, Borneo. Willdenowia 50, 65-76; DOI:10.3372/wi.50.50106

Dabravolski SA (2020) The Resurgence of Dirigent Story: Time for a Bacterial Chapter. Curr. Microbiol. 77, 517-521; DOI:10.1007/s00284-019-01809-2

Marzec M, Braszewska-Zalewska A, Hensel G (2020) Prime Editing: A New Way for Genome Editing. Trends Cell Biol. 30, 257-259; DOI:10.1016/j.tcb.2020.01.004

Saiz-Fernandez I, Lacuesta M, Perez-Lopez U, Sampedro MC, Barrio RJ, De Diego N (2020) Interplay between 1-aminocyclopropane-1-carboxylic acid, gamma-aminobutyrate and D-glucose in the regulation of high nitrate-induced root growth inhibition in maize. Plant Sci. 293:110418; DOI:10.1016/j.plantsci.2020.110418

Visentin I, Pagliarani C, Deva E, Caracci A, Turečková V, Novák O, Lovisolo C, Schubert A, Cardinale F (2020) A novel strigolactone-miR156 module controls stomatal behaviour during drought recovery. Plant Cell Environ., in press; DOI:10.1111/pce.13758

Sarikurkcu C, Zeljkovic Ćavar S (2020) Chemical composition and antioxidant activity of Phlomis leucophracta, an endemic species from Turkey. Nat. Prod. Res. 34, 851-854; DOI:10.1080/14786419.2018.1502767

Hrabina O, Malina J, Kostrhunova H, Novohradsky V, Pracharova J, Rogers N, Simpson DH, Scott P, Brabec V (2020) Optically Pure Metallohelices That Accumulate in Cell Nuclei, Condense/Aggregate DNA, and Inhibit Activities of DNA Processing Enzymes. Inorg. Chem. 59, 3304-3311; DOI:10.1021/acs.inorgchem.0c00092

Tomaštíková Dvořák E, Rutten T, Dvořák P, Tigai A, Ptošková K, Petrovská B, van Damme D, Houben A, Doležel J, Demidov D (2020) Functional Divergence of Microtubule-Associated TPX2 Family Members in Arabidopsis thaliana. Int. J. Mol. Sci. 21:2183; DOI:10.3390/ijms21062183

Gupta S, Hrdlička J, Ngoroyemoto N, Nemahunguni NK, Gucký T, Novák O, Kulkarni MG, Doležal K, Van Staden J (2020) Preparation and Standardisation of Smoke-Water for Seed Germination and Plant Growth Stimulation. J. Plant Growth Regul. 39, 338-345; DOI:10.1007/s00344-019-09985-y

Janeczko A, Biesaga-Kościelniak J, Dziurka M, Filek M, Hura K, Jurczyk B, Kula M, Oklestková J, Novák O, Rudolphi-Skórska E, Skoczowski A (2020) Biochemical and Physicochemical Background of Mammalian Androgen Activity in Winter Wheat Exposed to Low Temperature. J. Plant Growth Regul. 39, 507-507; DOI:10.1007/s00344-019-09995-w

Karalija E, Dahija S, Parić A, Zeljković Ćavar S (2020) Phytotoxic potential of selected essential oils against Ailanthus altissima (Mill.) Swingle, an invasive tree. Sustain. Chem. Pharm. 15:100219; DOI:10.1016/j.scp.2020.100219

Bansal M, Adamski NM, Toor PI, Kaur S, Molnár I, Holušová K, Vrána J, Doležel J, Valárik M, Uauy C, CHhuneja P (2020) Aegilops umbellulata introgression carrying leaf rust and stripe rust resistance genes Lr76 and Yr70 located to 9.47-Mb region on 5DS telomeric end through a combination of chromosome sorting and sequencing. Theor. Appl. Genet. 133, 903-915; DOI:10.1007/s00122-019-03514-x

Zieliński K, Krzewska M, Zur I, Juzoń K, Kopeć P, Nowicka A, Moravčiková J, Skrzypek E, Dubas E (2020) The effect of glutathione and mannitol on androgenesis in anther and isolated microspore cultures of rye (Secale cereale L.). Plant Cell Tiss. Org. 140, 577-592; DOI:10.1007/s11240-019-01754-9

Bačovský V, Čegan R, Šimoníková D, Hřibová E, Hobza R (2020) The Formation of Sex Chromosomes in Silene latifolia and S. dioica Was Accompanied by Multiple Chromosomal Rearrangements. Front. Plant Sci. 11:2015; DOI: 10.3389/fpls.2020.00205

Crlikova H, Kostrhunova H, Pracharova J, Kozsup M, Nagy S, Buglyó P, Brabec V, kasparkova J (2020) Antiproliferative, DNA binding, and cleavage properties of dinuclear Co(III) complexes containing the bioactive quinizarin ligand. J. Biol. Inorg. Chem. 25, 339-350; DOI:10.1007/s00775-020-01765-4

Glombik M, Bačovský V, Hobza R, Kopecký D (2020) Competition of Parental Genomes in Plant Hybrids. Front. Plant Sci. 11:200; DOI:10.3389/fpls.2020.00200

Mazur E, Kulik I, Hajný J, Friml J (2020) Auxin canalization and vascular tissue formation by TIR1/AFB-mediated auxin signaling in Arabidopsis. New Phytol. 226, 1375-1383; DOI:10.1111/nph.16446

Prerostova S, Dobrev PI, Kramna B, Gaudinova A, Knirsch V, Spichal L, Zatloukal M, Vankova R (2020) Heat Acclimation and Inhibition of Cytokinin Degradation Positively Affect Heat Stress Tolerance of Arabidopsis. Front. Plant Sci. 18:87; DOI: 10.3389/fpls.2020.00087

Piwowarczyk R, Ruraz K, Krasylenko Y, Kasinska J, Pedraja OS (2020) Seed micromorphology of representatives of holoparasitic Orobanchaceae genera from the Caucasus region and its taxonomic signifikance. Phytotaxa 432, 223-251; DOI: 10.11646/phytotaxa.432.3.1

Humplík J, Dostál J, Ugena L, Spíchal L, De Diego N, Vencálek O, Fürst T (2020) Bayesian approach for analysis of time-to-event data in plant biology. Plant Methods 16:14; DOI:10.1186/s13007-020-0554-1

Kaur P, Jindal S, Yadav B, Yadav I, Mahato A, Sharma P, Kaur S, Gupta OP, Vrána J, Šimková H, Doležel J, Gill BS, Meyer KFX, Khurana JP, Singh NK, Chhuneja P, Singh K (2020) Comparative analysis of chromosome 2A molecular organization in diploid and hexaploid wheat. Mol. Biol. Rep. 47, 1991-2003; DOI:10.1007/s11033-020-05295-9

Zeljkovic SC, Siljak-Yakovlev S, Tan K, Maksimovic M (2020) Chemical composition and antioxidant activity of Geranium macrorrhizum in relation to ploidy level and environmental conditions. Plant Syst. Evol. 306:UNSP 18; DOI: 10.1007/s00606-020-01649-9

Nsabiyera V, Baranwal D, Qureshi N, Kay P, Forrest K, Valarik M, Doležel J, Hayden MJ, Bariana HS, Bansal UK (2020) Fine Mapping of Lr49 Using 90K SNP Chip Array and Flow-Sorted Chromosome Sequencing in Wheat. Front. Plant Sci. 10:1787; DOI:10.3389/fpls.2019.01787

Svačina R, Karafiátová M, Malurová M, Serra H, Vítek D, Endo TR, Sourdille P, Bartoš J (2020) Development of Deletion Lines for Chromosome 3D of Bread Wheat. Front. Plant Sci. 10:1756; DOI:10.3389/fpls.2019.01756

Matušková V, Zatloukal M, Voller J, Grúz J, Pěkná Z, Briestenská K, Mistríková J, Spíchal L, Doležal K, Strnad M (2020) New aromatic 6-substituted 2 '-deoxy-9-(beta)-D-ribofuranosylpurine derivatives as potential plant growth regulators. Bioorg. Med. Chem. 28:115230; DOI:10.1016/j.bmc.2019.115230

Prasad A, Sedlářová M, Balukova A, Rác M, Pospíšil P (2020) Reactive Oxygen Species as a Response to Wounding: In Vivo Imaging in Arabidopsis thaliana. Front. Plant Sci. 10:1660; DOI:10.3389/fpls.2019.01660

Crepin A, Kučerová Z, Kosta A, Durand E, Caffarri S (2020) Isolation and characterization of a large photosystem I-light-harvesting complex II supercomplex with an additional Lhca1-a4 dimer in Arabidopsis. Plant J., in press; DOI: 10.1111/tpj.14634

Yalcin OU, Sarikurkcu C, Cengiz M, Gungor H, Ćavar Zeljković S (2020) Ganoderma carnosum and Ganoderma pfeifferi: Metal concentration, phenolic content, and biological aktivity. Mycologia 112, 1-8; DOI:10.1080/00275514.2019.1689748

Malaga S, Janeczko A, Janowiak F, Waligorski P, Oklestkova J, Dubas E, Krzewska M, Nowicka A, Surówka E, Rapacz M, Wójcik-Jagla M, Kopeć P, Hura T, Ostrowska A, Kaczanowska K, Žur I (2020) Involvement of homocastasterone, salicylic and abscisic acids in the regulation of drought and freezing tolerance in doubled haploid lines of winter barely. Plant Growht Reg. 90, 173-188; DOI:10.1007/s10725-019-00544-9

Šlachtová V, Šebela M, Torfs E, Oorts L, Cappoen D, Berka K, Bazgier V, Brulíková L (2020) Novel thiazolidinedione-hydroxamates as inhibitors of Mycobacterium tuberculosis virulence factor Zmp1. Eur. J. Med. Chem. 185:UNSP 111812; DOI:10.1016/j.ejmech.2019.111812

Samakovli D, Tichá T, Vavrdová T, Ovečka M, Luptovčiak I, Zapletalová V, Kuchařová A, Křenek P, Krasylenko Y, Margaritopoulou T, Roka L, Milioni D, Komis G, Hatzopoulos P, Šamaj J (2020) YODA-HSP90 module regulates phosphorylation-dependent inactivation of SPEECHLESS to control stomatal development under acute heat stress in Arabidopsis. Mol. Plant 13, 612-633; DOI:10.1016/j.molp.2020.01.001

Pavlovič A, Libiaková M, Bokor B, Jakšová J, Petřík I, Novák O, Baluška F (2020) Anaesthesia with diethyl ether impairs jasmonate signalling in the carnivorous plant Venus flytrap (Dionaea muscipula). Ann. Bot.-London 125, 173–183; DOI:10.1093/aob/mcz177

Jakšová J, Libiaková M, Bokor B, Petřík I, Novák O, Pavlovič A (2020) Taste for protein: Chemical signal from prey stimulates enzyme secretion through jasmonate signalling in the carnivorous plant Venus flytrap. Plant Physiol. Bioch. 146, 90–97; DOI: 10.1016/j.plaphy.2019.11.013

2019

Metcalfe CJ, Li J, Giorgi D, Doležel J, Piperidis N, Aitken KS (2019) Flow cytometric characterisation of
the complex polyploid genome of Saccharum officinarum and modern sugarcane cultivars. Sci. Rep. 9:19362; DOI: 10.1038/s41598-019-55652-3

Hajheidari M, Wan Y, Bhatia N, Vuolo F, Franco-Zorrilla JM, Karady M, Mentink RA, Wu AH, Oluwatobi BR, Muller B, Dello Ioio R, Laurent S, Ljung K, Huijser P, Gan XC, Tsiantis M (2019) Autoregulation of RCO by Low-Affinity Binding Modulates Cytokinin Action and Shapes Leaf Diversity. Curr. Biol. 29, 4183-4192.e6; DOI:10.1016/j.cub.2019.10.040

Nowicka A, Tokarz B, Zwyrtková J, Tomaštíková Dvořák E, Procházková K, Ercan U, Finke A, Rozhon W, Poppenberger B, Otmar M, Niezgodzki I, Krečmerová M, Schubert I, Pecinka A (2019) Comparative analysis of epigenetic inhibitors reveals different degrees of interference with transcriptional gene silencing and induction of DNA damage. Plant J., in press; DOI:10.1111/tpj.14612

Vilková M, Šoral M, Bečka M, Potočňák I, Sabolová D, Béres T, Dušek M, Imrich J (2019) H-1, C-13 and N-15 NMR of spiro acridines integrated with pyrrole scaffolds. Mag. Reson. Imaging 58, 204-214; DOI:10.1002/mrc.4974

Husičková A, Humplík JF, Hýbl M, Spíchal L, Lazár D (2019) Analysis of cold-developed vs. cold-acclimated leaves reveals various strategies of cold acclimation of field pea cultivars. Remote Sens. 11, 2964; DOI:10.3390/rs11242964

Nyine M, Uwimana B, Akech V, Brown A, Ortiz R, Doležel J, Lorenzen J, Swennen R (2019) Association genetics of bunch weight and its component traits in East African highland banana (Musa spp. AAA group). Theor. Appl. Genet. 132, 3295-3308; DOI:10.1007/s00122-019-03425-x

Ochędzan-Siodłak W, Siodłak D, Piontek A, Doležal K (2019) Titanium and Vanadium Catalysts with 2-Hydroxyphenyloxazoline and Oxazine Ligands for Ethylene-Norbornene (co)Polymerization. Catalysts 9:1041; DOI: 10.3390/catal9121041

Aremu AO, Masondo NA, Gruz J, Doležal K, Van Staden J (2019) Potential of Smoke-Water and One of Its Active Compounds (karrikinolide, KAR(1)) on the Phytochemical and Antioxidant Activity of Eucomis autumnalis. Antioxid. 8:611, DOI:10.3390/antiox8120611

Kloth KJ, Abreu IN, Delhomme N, Petřík I, Villard C, Strom C, Amini F, Novák O, Moritz T, Albrectsen BR (2019) PECTIN ACETYLESTERASE9 Affects the Transcriptome and Metabolome and Delays Aphid Feeding. Plant Physiol. 181,1704-1720; DOI:10.1104/pp.19.00635

Danks GB, Galbiati H, Raasholm M, Cleuren YNT, Valen E, Navratilova P, Thompson EM (2019) Trans-splicing of mRNAs links gene transcription to translational control regulated by mTOR. BMC Genomics 20:908; DOI: 10.1186/s12864-019-6277-x

Ivanizs L, Monostori I, Farkas A, Megyeri M, Mikó P, Türkösi E, Gaál E, Lenykó-Thegze A, Szoke-Pázsi K, Szakács E, Darkó E, Kiss T, Kilian A, Molnár I (2019) Unlocking the Genetic Diversity and Population Structure of a Wild Gene Source of Wheat, Aegilops biuncialis Vis., and Its Relationship With the Heading Time. Front. Plant Sci. 10:1531; DOI:10.3389/fpls.2019.01531

Šimoníková D, Němečková A, Karafiátová M, Uwimana B, Swennen R, Doležel J, Hřibová E (2019) Chromosome Painting Facilitates Anchoring Reference Genome Sequence to Chromosomes In Situ and Integrated Karyotyping in Banana (Musa Spp.). Front. Plant Sci. 10:1503; DOI:10.3389/fpls.2019.01503

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Goh DM, Cosme M, Kisiala AB, Mulholland S, Said ZMF, Spíchal L, Emery RJN, Declerck S, Guinel FC (2019) A Stimulatory Role for Cytokinin in the Arbuscular Mycorrhizal Symbiosis of Pea. Front. Plant Sci.10:262; DOI:10.3389/fpls.2019.00262

Wang P, Calvo-Polanco M, Reyt G, Barberon M, Champeyroux C, Santoni V, Maurel C, Franke RB, Ljung K, Novak O, Geldner N, Boursiac Y, Salt DE (2019) Surveillance of cell wall diffusion barrier integrity modulates water and solute transport in plants. Sci. Rep. 9:4227; DOI:10.1038/s41598-019-40588-5

Vavrdová T, Šamaj J, Komis G (2019) Phosphorylation of plant microtubule-associated proteins during cell division. Front. Plant Sci. 10:238; DOI:10.3389/fpls.2019.00238

Vavrdová T, Šamajová O, Křenek P, Ovečka M, Floková P, Šnaurová R, Šamaj J, Komis G (2019) Multicolour three dimensional structured illumination microscopy of immunolabeled plant microtubules and associated proteins. Plant Methods 15:22; DOI:10.1186/s13007-019-0406-z

Milanović J, Oklestkova J, Novák O, Mihaljević S (2019) Effects of Potato Spindle Tuber Viroid Infection on Phytohormone and Antioxidant Responses in Symptomless Solanum laxum Plants. J. Plant Growth Reg. 38; 325-332; DOI:10.1007/s00344-018-9842-7

Popelka O, Sochor M, Duchoslav M (2019) Reciprocal hybridization between diploid Ficaria calthifolia and tetraploid Ficaria verna subsp. verna: evidence from experimental crossing, genome size and molecular markers. Bot. J. Linn. Soc. 189, 293-310; DOI:10.1093/botlinnean/boy085

Tranova L, Buček J, Zatloukal M, Cankař P, Stýskala J (2019) Synthesis of [N-15(4)] purine labeled cytokinin glycosides derived from zeatins and topolins with 9-beta-d, 7-beta-d-glucopyranosyl, or 9-beta-d-ribofuranosyl group. J. Labell. Compd. Rad. 62, 118-125; DOI:10.1002/jlcr.3702

Nguyen KL, Grondin A, Courtois B, Gantet P (2019) Next-Generation Sequencing Accelerates Crop Gene Discovery. Trend Plant Sci. 24, 263-274; DOI:10.1016/j.tplants.2018.11.008

Pernickova K, Linc G, Gaal E, Kopecky D, Samajova O, Lukaszewski AJ (2019) Out-of-position telomeres in meiotic leptotene appear responsible for chiasmate pairing in an inversion heterozygote in wheat (Triticum aestivum L.) Chromosoma 128, 31-39; DOI:10.1007/s00412-018-0686-5

Starý T, Satková P, Piterková J, Mieslerová B, Luhova L, Mikulík J, Kašparovský T, Petřivalský M, Lochman J (2019) The elicitin -cryptogein's activity in tomato is mediated by jasmonic acid and ethylene signalling pathways independently of elicitin-sterol interactions. Planta 249, 739-749; DOI:10.1007/s00425-018-3036-1

Janečková H, Husičková A, Lazár D, Ferretti U, Pospíšil P, Špundová M (2019) Exogenous application of cytokinin during dark senescence eliminates the acceleration of photosystem II impairment caused by chlorophyll b deficiency in barley. Plant Physiol. Biochem. 136, 43-51; DOI: 10.1016/j.plaphy.2019.01.005

Hloušková P, Černý M, Kořínková N, Luklová M, Minguet EG, Brzobohatý B, Galuszka P, Bergougnoux V (2019) Affinity chromatography revealed 14-3-3 interactome of tomato (Solanum lycopersicum L.) during blue light-induced de-etiolation. J. Proteomic 193, 44-61; DOI:10.1016/j.jprot.2018.12.017

Takáč T, Pechan T, Šamajová O, Šamaj J (2019) Proteomic analysis of Arabidopsis pldα1 mutants revealed an important role of phospholipase D alpha 1 in chloroplast biogenesis. Front. Plant Sci. 10:89; DOI:10.3389/fpls.2019.00089

Holubová K, Hensel G, Vojta P, Tarkowski P, Bergougnoux V, Galuszka P (2019) Modification of Barley Plant Productivity Through Regulation of Cytokinin Content by Reverse-Genetics Approaches. Front. Plant Sci. 9:1996; DOI: 10.3389/fpls.2018.01996

Arshad W, Sperber K, Steinbrecher T, Nichols B, Jansen VAA, Leubner-Metzger G, Mummenhoff K (2019) Dispersal biophysics and adaptive significance of dimorphic diaspores in the annual Aethionema arabicum (Brassicaceae). New Phytol. 221, 1434-1446; DOI:10.1111/nph.15490

Pokorna A, Bobal P, Oravec M, Rarova L, Bobalova J, Jampilek J (2019) Investigation of Permeation of Theophylline through Skin Using Selected Piperazine-2,5-Diones. Molecules 24:566; DOI:10.3390/molecules24030566

Miranda C, Culp C, Škrabišová M, Joshi T, Belzile F, Grant DM, Bilyeu K (2019) Molecular tools for detecting Pdh1 can improve soybean breeding efficiency by reducing yield losses due to pod shatter. Mol. Breeding 39:27; DOI: 10.1007/s11032-019-0935-1

Balounova V, Gogela R, Cegan R, Cangren P, Zluvova J, Safar J, Kovacova V, Bergero R, Hobza R, Vyskot B, Oxelman B, Charlesworth D, Janousek B (2019) Evolution of sex determination and heterogamety changes in section Otites of the genus Silene. Sci. Rep. 9:1045; DOI:10.1038/s41598-018-37412-x

Lazaro A, Zhou YH, Giesguth M, Nawaz K, Bergonzi S, Pecinka A, Coupland G, Albani MC (2019) PERPETUAL FLOWERING2 coordinates the vernalization response and perennial flowering in Arabis alpina. J. Exp. Bot. 70, 949-961; DOI:10.1093/jxb/ery423

Wilhelmsson PKI, Chandler JO, Fernandez-Pozo N, Graeber K, Ullrich KK, Arshad W, Khan S, Hofberger JA, Buchta K, Edger PP, Pires JC, Schranz ME, Leubner-Metzger G, Rensing SA (2019) Usability of reference-free transcriptome assemblies for detection of differential expression: a case study on Aethionema arabicum dimorphic seeds. BMC Genomics 20:95; DOI:10.1186/s12864-019-5452-4

Wasternack C, Strnad M (2019) Jasmonates are signals in the biosynthesis of secondary metabolites - Pathways, transcription factors and applied aspects - A brief review. New Biotechnol. 48, 1-11; DOI:10.1016/j.nbt.2017.09.007

Tulpová Z, Luo MC, Toegelová H, Visendi P, Hayashi S, Vojta P, Paux E, Kilian A, Abrouk M, Bartoš J, Hajdúch M, Batley J, Edwards D, Doležel J, Šimková H (2019) Integrated physical map of bread wheat chromosome arm 7DS to facilitate gene cloning and comparative studies. New. Biotechnol. 48, 12-19; DOI:10.1016/j.nbt.2018.03.003

Hudzieczek V, Cegan R, Cermak T, Bacovska N, Machalkova Z, Dolezal K, Plihalova L, Voytas D, Hobza R, Vyskot B (2019) Agrobacterium rhizogenes-mediated transformation of a dioecious plant model Silene latifolia. New. Biotechnol. 48, 20-28; DOI:10.1016/j.nbt.2018.04.001

Bieleszová K, Pařízková B, Kubeš M, Husičková A, Kubala M, Ma Q, Sedlářová M, Robert S, Doležal K, Strnad M, Novák O, Žukauskaitė A (2019) New fluorescently labeled auxins exhibit promising anti-auxin activity. New Biotechnol. 48, 44-57; DOI:10.1016/j.nbt.2018.06.003

Podlešáková K, Ugena L, Spíhal L, Doležal K, De Diego N (2019) Phytohormones and polyamines regulate plant stress responses by altering GABA pathway. New Biotechnol. 48; 53-65; DOI:10.1016/j.nbt.2018.07.003

Hýlová A, Pospíšil T, Spíchal L, Mateman JJ, Blanco-Ania D, Zwanenburg B (2019) New hybrid type strigolactone mimics derived from plant growth regulator auxin. New Biotechnol. 48, 76-82; DOI:10.1016/j.nbt.2018.08.001

Kulkarni MG, Rengasamy KRR, Pendota SC, Gruz J, Plačková L, Novák O, Doležal K, Van Staden J (2019) Bioactive molecules derived from smoke and seaweed Ecklonia maxima showing phytohormone-like activity in Spinacia oleracea L. New Biotechnol. 48, 83-89; DOI:10.1016/j.nbt.2018.08.004

Tarkowski P, Frebort I (2019) Plant Biotechnology: Green for Good IV. New Biotechnol. 48, III-III, DOI: 10.1016/j.nbt.2018.05.198

Hradilová I, Duchoslav M, Brus J, Pechanec V, Hýbl M, Kopecký P, Smržová L, Štefelová N, Václavek T, Bariotakis M, Machalová J, Hron K, Pirintsos S, Smýkal P (2019) Variation in wild pea (Pisum sativum subsp. elatius) seed dormancy and its relationship to the environment and seed coat traits. PEERJ 7: e6263; DOI:10.7717/peerj.6263

Vrabka J, Niehaus EM, Munsterkotter M, Proctor RH, Brown DW, Novák O, Pěnčík A, Tarkowská D, Hromadová K, Hradilová M, Oklešt'ková J, Oren-Young L, Idan Y, Sharon A, Maymon M, Elazar M, Freeman S, Guldener U, Tudzynski B, Galuszka P, Bergougnoux V (2019) Production and Role of Hormones During Interaction of Fusarium Species With Maize (Zea mays L.) Seedlings. Front. Plant Sci. 9:1936; DOI:10.3389/fpls.2018.01936

Stirbet A., Lazár D., Papageorgiou G.C., Govindjee (2019) Chlorophyll a fluorescence in cyanobacteria: relation to photosynthesis. In: Mishra A.K., Tiwari D.N., Rai A.N. (eds.) Cyanobacteria: From Basic Science to Applications, 79-130, Academic Press, Elsevier, Philadelphia; DOI: 10.1016/B978-0-12-814667-5.00005-2

Sochor M, Jemelková M, Doležalová I (2019) Phenotyping and SSR markers as a tool for identification of duplicates in lettuce germplasm. Czech J. Genet. Plant Breed. 55, 110-119; DOI:10.17221/68/2018-CJGPB

Kopecky D, Lukaszewski AJ (2019) Misdivision of Telocentrics and Isochromosomes in Wheat. Cytogenet. Genome Res. 157, 179-187; DOI:10.1159/000497301

Balarynová J, Fellner M (2019) Expression of genes encoding PIP aquaporins in tomato seeds exposed to blue radiation and mercury. Biol. Plant. 63, 1-10; DOI:10.32615/bp.2019.001

Takáč T, Šamajová O, Vadovič P, Pechan T, Šamaj J (2019) Shot-gun proteomic analysis on roots of Arabidopsis pldα1 mutants suggesting the involvement of PLDα1 in mitochondrial protein import, vesicular trafficking and glucosinolate biosynthesis. Int. J. Mol. Sci. 20, 82; DOI:10.3390/ijms20010082

Kumar A, Prasad A, Sedlářová M, Pospíšil P (2019) Organic radical imaging in plants: Focus on protein radicals. Free Radical Bio. Med. 130, 568-575; DOI:10.1016/j.freeradbiomed.2018.10.428

Milanović J, Oklestkova J, Majdandžić A, Novák O, Mihaljević S (2019) Organ-specific differences in endogenous phytohormone and antioxidative responses in potato upon PSTVd infection. J. Plant Physiol. 232, 107-114; DOI: 10.1016/j.jplph.2018.10.027

Nakato GV, Christelová P, Were E, Nyine M, Coutinho TA, Doležel J, Uwimana B, Swennen R, Mahuku G (2019) Sources of resistance in Musa to Xanthomonas campestris pv. musacearum, the causal agent of banana xanthomonas wilt. Plant Pathol. 68, 49-59; DOI:10.1111/ppa.12945

Nožková V, Mieslerová B, Luhová L, Piterková J, Novák O, Špundová M, Lebeda A (2019) Effect of heat-shock pre-treatment on tomato plants infected by powdery mildew fungus. Plant Protect. Sci. 55, 31-42; DOI: 10.17221/24/2018-PPS

Abdallah E, Salem AH, Ali MMA, Kamal KY (2019) Genetic analysis of thermotolerance and grain yield traits of bread wheat (Triticum aestivum L.) using diallel analysis. Biosci. Res. 16, 2235-2245

Oliwa J, Stawoska I, Janeczko A, Oklešťková J, Skoczowski A(2019) Response of the photosynthetic apparatus in the tropical fern Platycerium bifurcatum to increased ozone concentration. Photosynthetica 57, 1119-1129; DOI:10.32615/ps.2019.117

Vilková M, Šoral M, Bečka M, Potočňák M, Sabolová D, Béres T, Dušek M, Imrich J (2019) ¹H, ¹³C and ¹⁵N NMR of spiro acridines integrated with pyrrole scaffolds. Magn. Reson. Chem. 58:204214; DOI:10.1002/mrc.4974

Demidov D, Heckmann S, Weiss O, Rutten T, Dvořák Tomaštíková E, Kuhlmann M, Scholl P, Municio CM, Lermontova I, Houben A (2019) Deregulated Phosphorylation of CENH3 at Ser65 Affects the Development of Floral Meristems in Arabidopsis thaliana. Front. Plant Sci. 10:928; DOI:10.3389/fpls.2019.00928

Coudert Y, Novák O, Harrison CJ (2019) A KNOX-cytokinin regulatory module predates the origin of indeterminate vascular plants. Curr. Biol. 29:2743; DOI:10.1016/j.cub.2019.06.083

Beaugelin I, Chevalier A, D’Alessandro S, Ksas B, Novák O, Strnad M, Forzani C, Hirt H, Havaux, Monnet F (2019) OXI1 and DAD regulate light-induced cell death antagonistically through jasmonate and salicylate levels. Plant Physiol. 180, 1691-1708; DOI:10.1104/pp.19.00353

Blanco-Ania D, Mateman JJ, Hýlová A, Spíchal L, Debie LM, Zwanenburg B (2019) Hybrid-type strigolactone analogues derived from auxins. Pest Manag. Sci. 75, 3113-3121; DOI:10.1002/ps.5553

Kopecký D, Talukder SK, Zwyrtková J, Trammel M, Doležel J, Saha MC (2019) Inter-morphotype hybridization in tall fescue (Festuca arundinacea Schreb.): Exploration of meiotic irregularities and potential for breeding" has been accepted in Euphytica. Euphytica 215:97; DOI:10.1007/s10681-019-2419-0

Vain T, Raggi S, Ferro N, Barange DK, Kieffer M, Ma Q, Doyle SM, Thelander M, Pařízková B, Novák O, Ismail A, Enquist PA, Rigal A, Łangowska M, Harborough SR, Zhang Y, Ljung K, Callis J, Almqvist F, Kepinski S, Estelle M, Pauwels L, Robert S (2019) Selective auxin agonists induce specific AUX/IAA protein degradation to modulate plant development. Proc. Natl. Acad. Sci. U.S.A. 116, 6463-6472; DOI:10.1073/pnas.1809037116

Jameson PE, Dhandapani P, Song J, Zatloukal M, Strnad M, Remus-Emsermann MNP, Schlechter RO, Novák O (2019) The Cytokinin Complex Associated With Rhodococcus fascians: Which Compounds Are Critical for Virulence? Front Plant Sci 10:674; DOI:10.3389/fpls.2019.00674

Godzien J, Kalaska B, Adamska-Patruno E, Siroka J, Ciborowski M, Kretowski A, Barbas C (2019) Oxidized glycerophosphatidylcholines in diabetes through non-targeted metabolomics: Their annotation and biological meaning. J. Chromatogr. B 1120, 62-70; DOI:10.1016/j.jchromb.2019.04.05

Linic I, Šamec D, Grúz J, Bok VV, Strnad M, Salopek-Sondi B (2019) Involvement of phenolic ccids in short-term adaptation to salinity stress is species-specific among brassicaceae. Plants-Basel 8:155; DOI:10.3390/plants8060155

Janeczko A, Pociecha E, Dziurka M, Jurczyk B, Libik-Konieczny M, Oklestkova J, Novák O, Pilarska M, Filek M, Rudolphi-Skórska E, Sadura I, Siwek A et al. 2019. Changes in content of steroid regulators during cold hardening of winter wheat - Steroid physiological/biochemical activity and impact on frost tolerance. Plant Physiol. Biochem. 139, 215-228; DOI:10.1016/j.plaphy.2019.03.020

2018

Cherukupalli S, Chandrasekaran B, Kryštof V (2018) Synthesis, anticancer evaluation, and molecular docking studies of some novel 4,6-disubstituted pyrazolo[3,4-d]pyrimidines as cyclin-dependent kinase 2 (CDK2) inhibitors. Bioorganic Chem. 79, 46-59; DOI: 10.1016/j.bioorg.2018.02.030

Čakar J, Lojo NK, Haverić A, Hadžić M, Lasić L, Zeljković SC, Haverić S, Bajrović K (2018) Satureja subspicata and S. horvatii Extracts Induce Overexpression of the BCl-2 Family of Anti-apoptotic Genes and Reduce Micronuclei Frequency in Mice. Natural Product Communications, 13, 723-726

Dhandapani P, Song J, Novak O, Jameson PE (2018) Both epiphytic and endophytic strains of Rhodococcus fascians influence transporter gene expression and cytokinins in infected Pisum sativum L. seedlings. Plant Growth Regul. 85, 231-242; DOI: 10.1007/s10725-018-0387-3

Ford BA, Foo E, Sharwood R, Karafiatova M, Vrána J, MacMillan C, Nichols DS, Steuernagel B, Uauy C, Doležel J, Chandler PM, Spielmeyer W (2018) Rht18 Semidwarfism in Wheat Is Due to Increased GA 2-oxidaseA9 Expression and Reduced GA Content. Plant Physiol. 177, 168-180; DOI: 10.1104/pp.18.00023

Gaál E, Valárik M, Molnár I, Farkas A, Linc G (2018) Identification of COS markers specific for Thinopyrum elongatum chromosomes preliminary revealed high level of macrosyntenic relationship between the wheat and Th. elongatum genomes. Plos One 13: e0208840; DOI: 10.1371/journal.pone.0208840

Himmelbach A, Ruban A, Walde I, Šimková H, Doležel J, Hastie A, Stein N, Mascher M (2018) Discovery of multi‐megabase polymorphic inversions by chromosome conformation capture sequencing in large‐genome plant species. Plant J. 96, 1309-1316; DOI: 10.1111/tpj.14109

Ivanizs L, Farkas A, Linc G, Molnár-Lang M, Molnár I (2018) Molecular cytogenetic and morphological characterization of two wheat-barley translocation lines. Plos One 13: e0198758; DOI: 10.1371/journal.pone.0198758

Moncaleán P, Garcia-Mendiguren O, Novák O, Strnad M, Goicoa T, Ugarte MD, Montalbán IA (2018) Temperature and Water Availability During Maturation Affect the Cytokinins and Auxins Profile of Radiata Pine Somatic Embryos. Front. Plant Sci. 9:1898; DOI: 10.3389/fpls.2018.01898

Ramos-Enriqez MA, Rárová L, Iglesias-Arteaga MA (2018) Synthesis of dimeric spirostanols linked through a 1,4-dimethylidenebenzene moiety by double BF3 center dot Et2O-catalyzed aldol condensation of steroid sapogenins and terephtalaldehyde. Steroids 140, 58-61; DOI: 10.1016/j.steroids.2018.08.005

Robinson DG, Hawes CH, Hillmer S, Jurgens G, Schwechheimer C, Stierhof YD, Viotti C, Baluška F, Strnad M, Mancuso S (2018) Rebuttal: Substantial Evidence for Auxin Secretory Vesicles. Plant Physiol. 176, 1885-1888; DOI: 10.1104/pp.18.00316

Szymanska R, Pospíšil P, Kruk J (2018) Plant-Derived Antioxidants in Disease Prevention 2018. Oxid. Med. Cell. Longev. 2018:2068370; DOI: 10.1155/2018/2068370

Takáč T, Šamajová O, Pechan T, Šamaj J (2018) New regulatory roles of phospholipase Da1 in Arabidopsis as revealed by shot-gun proteomic analysis. New Biotechnol. 44, S 17; DOI: 10.1016/j.nbt.2018.05.1256

Vyplelová P, Ovečka M, Komis G, Šamaj J (2018) Advanced microscopy methods for bioimaging of mitotic microtubules in plants. Method. Cell. Biol. 45, 129-158; DOI: 10.1016/bs.mcb.2018.03.019

Macháčková P, Majeský L, Hroneš M, Hřibová E, Trávníček B, Vašut RJ (2018) New chromosome counts and genome size estimates for 28 species of Taraxacum sect. Taraxacum. Comp. Cytogenet. 12, 403-420; DOI: 10.3897/CompCytogen.v12i3.27307

Kumari A, Naidoo D, Baskaran P, Doležal K, Nisler J, Van Staden J (2018) Phenolic and flavonoid production and antimicrobial activity of Gymnosporia buxifolia (L.) Szyszyl cell cultures. Plant Growth Reg. 86, 333-338; DOI: 10.1007/s10725-018-0432-2

Dube L, Naidoo KK, Arthur GD, Aremu AO, Gruz J, Šubrtová M, Jarošová M, Tarkowski P, Doležal K (2018) Regulation of growth, nutritive, phytochemical and antioxidant potential of cultivated Drimiopsis maculata in response to biostimulant (vermicompost leachate, VCL) application. Plant Growth Reg. 86, 433-444; DOI: 10.1007/s10725-018-0441-1

Sardos J, Christelová P, Čížková J, Paofa J, Sachter-Smith GL, Janssens SB, Rauka G, Ruas M, Daniells JW, Doležel J, Roux N (2018) Collection of new diversity of wild and cultivated bananas (Musa spp.) in the Autonomous Region of Bougainville, Papua New Guinea. Genet. Resour. Crop Ev. 65, 2267-2286; DOI: 10.1007/s10722-018-0690-x

Blehová A, Škoríková M, Šamajová O, Kaštier P, Matušíková I (2018) Maize miniendosperm proliferation in vitro is characterized by tracheary element formation. Plant Cell Tiss. Org. 135, 455-462; DOI: 10.1007/s11240-018-1478-6

Florencio-Ortiz V, Novák O, Casas JL (2018) Local and systemic hormonal responses in pepper (Capsicum annuum L.) leaves under green peach aphid (Myzus persicae Sulzer) infestation. J. Plant Physiol. 231, 356-363; DOI: 10.1016/j.jplph.2018.10.015

de la Fuente AG, Traldi F, Siroka J, Kretowski A, Ciborowski M, Otero A, Barbas C, Godzien J (2018) Characterization and annotation of oxidized glycerophosphocholines for non-targeted metabolomics with LC-QTOF-MS data. Anal. Chim. Acta 1037, 358-368; DOI: 10.1016/j.aca.2018.08.005

Trněný O, Brus J, Hradilová I, Rathore A, Das RR, Kopecký P, Coyne CJ, Reeves P, Richards C, Smýkal P (2018) Molecular Evidence for Two Domestication Events in the Pea Crop. Genes 9: 535; DOI: 10.3390/genes9110535

Buček J, Zatloukal M, Havlíček L, Plíhalová L, Pospíšil T, Novák O, Doležal K, Strnad M (2018) Total synthesis of [N-15]-labelled C6-substituted purines from [N-15]-formamide-easy preparation of isotopically labelled cytokinins and derivatives. Roy. Soc. Open Sci. 5:181322; DOI: 10.1098/rsos.181322

Ramireddy E, Galuszka P, Schmulling T (2018) Zn-fortified cereal grains in field-grown barley by enhanced root cytokinin breakdown. Plant Signaling Behavior13: e1530023; DOI: 10.1080/15592324.2018.1530023

Holubová K, Hensel G, Vojta P, Tarkowski P, Bergougnoux V, Galuszka P (2018) Modification of Barley Plant Productivity Through Regulation of Cytokinin Content by Reverse-Genetics Approaches. Front. Plant Sci. 9:1676; DOI: 10.3389/fpls.2018.01676

Šebela M, Jahodářová E, Raus M, Lenobel R, Hašler P (2018) Intact cell MALDI-TOF mass spectrometric analysis of Chroococcidiopsis cyanobacteria for classification purposes and identification of possible marker proteins. Plos One 13: e0208275; DOI: 10.1371/journal.pone.0208275

Kind S, Hinsch J, Vrabka J, Hradilová M, Majeská-Čudejkova M, Tudzynski P, Galuszka P (2018) Manipulation of cytokinin level in the ergot fungus Claviceps purpurea emphasizes its contribution to virulence. Curr. Genet. 64, 1303-1319; DOI: 10.1007/s00294-018-0847-3

Perutka Z, Šebela M (2018) A Little-Known Trypsin Proteoform. Molecules 23: 2637; DOI: 10.3390/molecules23102637

Dančák M, Hroneš M, Sochor M, Sochorová Z (2018) Thismia kelabitiana (Thismiaceae), a new unique Fairy Lantern from Borneo potentially threatened by commercial logging. Plos One 13:e0203443; DOI: 10.1371/journal.pone.0203443

Němečková A, Christelová P, Čížková J, Nyine M, Van den Houwe I, Svačina R, Uwimana B, Swennen R, Doležel J, Hřibová E (2018) Molecular and Cytogenetic Study of East African Highland Banana. Front. Plant Sci. 9: 1371; DOI: 10.3389/fpls.2018.01371

Orman-Ligeza B, Morris EC, Parizot B, Lavigne T, Babe A, Ligeza A, Klein S, Sturrock C, Xuan W, Novák O, Ljung K, Fernandez MA, Rodriguez PL, Dodd IC, De Smet I, Chaumont F, Batoko H, Perilleux C, Lynch JP, Bennett MJ, Beeckman T, Draye X (2018) The Xerobranching Response Represses Lateral Root Formation When Roots Are Not in Contact with Water. Curr. Biol. 28, 3165-3173.e5; DOI: 10.1016/j.cub.2018.07.074

Cucinotta M, Manrique S, Cuesta C, Benkova E, Novak O, Colombo L (2018) CUP-SHAPED COTYLEDON1 (CUC1) and CUC2 regulate cytokinin homeostasis to determine ovule number in Arabidopsis. J. Exp. Bot. 69, 5169-5176; DOI: 10.1093/jxb/ery281

Kokáš FZ, Bergougnoux V, Čudejková MM (2018) SATrans: New Free Available Software for Annotation of Transcriptome and Functional Analysis of Differentially Expressed Genes. J.Comput. Biol., in press; DOI: 10.1089/cmb.2018.0149

Filiault DL, Ballerini ES, Mandáková T, Akoz G, Derieg NJ, Schmutz J, Jenkins J, Grimwood J, Shu SQ, Hayes RD, Hellsten U, Barry K, Yan JY, Mihaltcheva S, Karafiátová M, Nizhynska V, Kramer EM, Lysak MA, Hodges SA, Nordborg M (2018) The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history. Elife 7: e36426; DOI: 10.7554/eLife.36426

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Karlíková R, Široká J, Mech M, Friedecký D, Janečková H, Mádrová L, Hrdinová F, Drábková Z, Dobešová O, Adam T, Jahn P (2018) Newborn foal with atypical myopathy. J.Vet. Intern. Med. 32, 1768-1772; DOI: 10.1111/jvim.15236

Danihlík J, Škrabišová M, Lenobel R, Šebela M, Omar E, Petřivalský M, Crailsheim K, Brodschneider R (2018) Does the Pollen Diet Influence the Production and Expression of Antimicrobial Peptides in Individual Honey Bees? Insect 9:79; DOI: 10.3390/insects9030079

Nisler J, Zatloukal M, Sobotka R, Pilný J, Zdvihalová B, Novák O, Strnad M, Spíchal L (2018) New Urea Derivatives Are Effective Anti-senescence Compounds Acting Most Likely via a Cytokinin-Independent Mechanism. Front. Plant Sci. 9:1225; DOI: 10.3389/fpls.2018.01225

Ugena L, Hýlová A, Podlešáková K, Humplík JF, Doležal K, De Diego N, Spíchal L (2018) Characterization of Biostimulant Mode of Action Using Novel Multi-Trait High-Throughput Screening of Arabidopsis Germination and Rosette Growth. Front. Plant Sci. 9:1327; DOI: 10.3389/fpls.2018.01327

Pracharova J, Novohradsky V, Kostrhunova H, Štarha P, Trávníček, Z, Kasparkova J, Brabec V (2018) Half-sandwich Os(ii) and Ru(ii) bathophenanthroline complexes: anticancer drug candidates with unusual potency and a cellular activity profile in highly invasive triple-negative breast cancer cells. Dalton T. 47, 12197-12208; DOI: 10.1039/c8dt02236d

Rey E, Abrouk M, Keeble-Gagnere G, Karafiátová M, Vrána J, Balzergue S, Soubigou-Taconnat L, Brunaud V, Martin-Magniette ML, Endo TR, Bartoš J, Appels R, Doležel J (2018) Transcriptome reprogramming due to the introduction of a barley telosome into bread wheat affects more barley genes than wheat. Plant Biotechnol. J. 16, 1767-1777; DOI: 10.1111/pbi.12913

Kopecký D, Felder T, Schubiger FX, Mahelka V, Bartoš J, Doležel J, Boller B (2018) Frequent occurrence of triploid hybrids Festuca pratensis x F-apennina in the Swiss Alps. Alpine Bot. 128, 121-132; DOI: 10.1007/s00035-018-0204-7

Keeble-Gagnere G, Rigault P, Tibbits J, Pasam R, Hayden M, Forrest K, Frenkel Z, Korol A, Huang BE, Cavanagh C, Taylor J, Abrouk M, Sharpe A, Konkin D, Sourdille P, Darrier B, Choulet F, Bernard A, Rochfort S, Dimech A, Watson-Haigh N, Baumann U, Eckermann P, Fleury D, Juhasz A, Boisvert S, Nolin MA, Doležel J, Šimková H, Toegelová H, Šafář J, Luo MC, Camara F, Pfeifer M, Isdale D, Nystrom-Persson J, Koo DH, Tinning M, Cui DQ, Ru ZG, Appels R (2018) Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome. Genome Biol. 19: 112; DOI: 10.1186/s13059-018-1475-4

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Marchetti CF, Škrabišová M, Galuszka P, Novák O, Causin HF (2018) Blue light suppression alters cytokinin homeostasis in wheat leaves senescing under shading stress. Plant Physiol. Bioch. 130, 647-657; DOI: 10.1016/j.plaphy.2018.08.005

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Valigurová A, Pecková R, Doležal K, Sak B, Květoňová D, Kváč M, Nurcahyo W, Foitová I (2018) Limitations in the screening of potentially anti-cryptosporidial agents using laboratory rodents with gastric cryptosporidiosis. Folia Parasit. 65:010; DOI: 10.14411/fp.2018.010

Yuan Y, Milec Z, Bayer PE, Vrána J, Doležel J, Edwards D, Erskine W, Kaur P (2018) Large-Scale Structural Variation Detection in Subterranean Clover Subtypes Using Optical Mapping. Front. Plant Sci. 9:971; DOI: 10.3389/fpls.2018.00971

Moreno R, Castro P, Vrána J, Kubaláková M, Cápal P, García V, Gil J, Millán T, Doležel J (2018) Integration of Genetic and Cytogenetic Maps and Identification of Sex Chromosome in Garden Asparagus (Asparagus officinalis L.). Front. Plant Sci. 9:1068; DOI: 10.3389/fpls.2018.01068

Šimura J, Antoniadi I, Široká J, Tarkowská D, Strnad M, Ljung K, Novák O (2018) Plant Hormonomics: Multiple Phytohormone Profiling by Targeted Metabolomics. Plant Physiol. 177, 476-489; DOI: 10.1104/pp.18.00293

Čakar J, Lojo NK, Haverić A, Hadžić M, Lasić L, Zeljković SC, Haverić S, Bajrović K (2018) Satureja subspicata and S. horvatii Extracts Induce Overexpression of the BCl-2 Family of Anti-apoptotic Genes and Reduce Micronuclei Frequency in Mice. Natural Product Communications 13, 723-726.

Poitout A, Crabos A, Petřík I, Novák O, Krouk G, Lacombe B, Ruffel S (2018) Responses to Systemic Nitrogen Signaling in Arabidopsis Roots Involve trans-Zeatin in Shoots. Plant Cell 30, 1243-1257; DOI: 10.1105/tpc.18.00011

Xing LP, Hu P, Liu JQ, Witek K, Zhou S, Xu JF, Zhou WH, Gao L, Huang ZP, Zhang RQ, Wang X, Chen PD, Wang HY, Jones JDG, Karafiátová M, Vrána J, Bartoš J, Doležel J, Tian YC, Wu YF, Cao AZ (2018) Pm21 from Haynaldia villosa Encodes a CC-NBS-LRR Protein Conferring Powdery Mildew Resistance in Wheat. Mol. Plant 11, 874-878; DOI: 10.1016/j.molp.2018.02.013

Kastier P, Krasylenko YA, Martincova M, Panteris E, Šamaj J, Blehová, A (2018) Cytoskeleton in the Parasitic Plant Cuscuta During Germination and Prehaustorium Formation. Front. Plant Sci. 9:794; DOI: 10.3389/fpls.2018.00794

Egertová Z, Eckstein J, Sochor M, Vega M (2018) Lamprospora sylvatica (Pyronemataceae), a new bryophilous ascomycete on Dicranum montanum. Phytotaxa 357, 17-29; DOI: 10.11646/phytotaxa.357.1.2

Ma XM, Zhang YJ, Turečková V, Xue GP, Fernie AR, Mueller-Roeber B, Balazadeh S (2018) The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato. Plant Physiol. 177, 1286-1302; DOI: 10.1104/pp.18.00292

Nyine M, Uwimana B, Blavet N, Hřibová E, Vanrespaille H, Batte M, Akech V, Brown A, Lorenzen J, Swennen R, Doležel J (2018) Genomic Prediction in a Multiploid Crop: Genotype by Environment Interaction and Allele Dosage Effects on Predictive Ability in Banana. Plant Genome 11:UNSP 170090; DOI: 10.3835/plantgenome2017.10.0090

Barbuščáková Z, Kozubíková H, Zálešák F, Doležal K, Pospíšil J (2018) General approach to neolignan-core of the boehmenan natural product family. Monatsh. Chem. 149, 737-748; DOI: 10.1007/s00706-017-2132-4

Sochor M, Hroneš M, Dančák M (2018) New insights into variation, evolution and taxonomy of fairy lanterns (Thismia, Thismiaceae) with four new species from Borneo. Plant Syst. Evol. 304, 699-721; DOI: 10.1007/s00606-018-1504-5

Nožková V, Šmíd P, Horváth P, Hrabovský M, Ilík P (2018) Non-invasive monitoring of hydraulic surge propagation in a wounded tobacco plant. Plants Methods 14:38; DOI: 10.1186/s13007-018-0307-6

Minina EA, Moschou PN, Vetukuri RR, Sanchez-Vera V, Cardoso C, Liu QS, Elander PH, Pernilla H, Dalman K, Beganovic M, Yilmaz JL, Marmon S, Shabala L, Suarez MF, Ljung K, Novák O, Shabala S, Stymne S, Hofius D, Bozhkov PV (2018) Transcriptional stimulation of rate-limiting components of the autophagic pathway improves plant fitness. J. Exp. Bot. 69, 1415-1432; DOI: 10.1093/jxb/ery010

Lamie PF, Philoppes JN, Rárová L (2018) Design, synthesis, and biological evaluation of novel 1,2-diaryl-4-substituted-benzylidene-5(4H)-imidazolone derivatives as cytotoxic agents and COX-2/LOX inhibitors. Arch. Pharm. 351:e1700311; DOI: 10.1002/ardp.201700311

Wasternack C, Hause B (2018) A Bypass in Jasmonate Biosynthesis – the OPR3-independent Formation. Trends Plant Sci. 23, 276-279; DOI: 10.1016/j.tplants.2018.02.011

Baluška F, Strnad M, Mancuso S (2018) Substantial Evidence for Auxin Secretory Vesicles. Plant Pfysiol. 176, 2586-2587; DOI: 10.1104/pp.18.00316

Fan LG, Zhao L, Hu W, Li WN, Novák O, Strnad M, Simon S, Friml J, Shen JB, Jiang LW, Qiu QS (2018) Na+, K+/H+ antiporters regulate the pH of endoplasmic reticulum and auxin-mediated development. Plant Cell Environ. 41, 850-864; DOI: 10.1111/pce.13153

Hroneš M, Rejzek M, Sochor M, Svátek M, Kvasnica J, Egertová Z, Pereira JT, Nilus R, Dančák M (2018) Two new species of Thismia subsect. Odoardoa (Thismiaceae) from Borneo. Plant Ecol. Evol. 151, 110-118; DOI: 10.5091/plecevo.2018.1387

Novák O, Floková K (2018) An UHPLC-MS/MS Method for Target Profiling of Stress-Related Phytohormones. Plant Metabolomics 1778, 183-192; DOI: 10.1007/978-1-4939-7819-9_13

Inceer H, Kalmuk NA, Čížková J, Doležel J (2018) Genome size in some taxa of Crepis L. (Asteraceae) from Turkey. Cyrologia 71, 217-223; DOI: 10.1080/00087114.2018.1460057

Formentin E, Barizza E, Stevanato P, Falda M, Massa F, Tarkowská D, Novák O, Lo Schiavo F (2018) Fast Regulation of Hormone Metabolism Contributes to Salt Tolerance in Rice (Oryza sativa spp. Japonica, L.) by Inducing Specific Morpho-Physiological Responses. Plants 7:75; DOI: 10.3390/plants7030075

Salina EA, Nesterov MA, Frenkel Z, Kiseleva AA, Timonova EM, Magni F, Vrána J, Šafář J, Šimková H, Doležel J, Korol A, Sergeeva EM (2018) Features of the organization of bread wheat chromosome 5BS based on physical mapping. BMC Genomics 19:80; DOI: 10.1186/s12864-018-4470-y

Sochor M, Egertová Z, Hroneš M, Dančák M (2018) Rediscovery of Thismia neptunis (Thismiaceae) after 151 years. Phytotaxa 340, 71-78; DOI: 10.11646/phytotaxa.340.1.5

Jahodářová E, Dvořák P, Hašler P, Holušová K, Poulíčková A (2018) Elainella gen. nov.: a new tropical cyanobacterium characterized using a complex genomic approach. Eur. J. Phycol. 53, 39-51; DOI: 10.1080/09670262.2017.1362591

Renčo M, Čermák V, Tománková K, Čudejková Majeská M (2018) Morphological and molecular characterisation of Heterodera filipjevi (Madzhidov, 1981) from the Slovak Republic, Nematology 20, 253-264; DOI: 10.1163/15685411-00003138

Egertova Z, Dobbeler P, Sochor M (2018) Octosporopsis erinacea and Octospora kelabitiana (Pezizales) – two new hepaticolous ascomycetes from Borneo. Mycol. Prog. 17, 103-113; DOI: 10.1007/s11557-017-1354-5

Diaz M, Pecinka A (2018) Scaffolding for Repair: Understanding Molecular Functions of the SMC5/6 Complex. Genes 9:36; DOI: 10.3390/genes9010036

Doležel J, Čížková J, Šimková H, Bartoš J (2018) One Major Challenge of Sequencing Large Plant Genomes Is to Know How Big They Really Are. Int. J. Mol. Med. 19, 3554; DOI: 10.3390/ijms19113554

Apkinar BA, Biyiklioglu S, Alptekin B, Havránková M, Vrána J, Doležel J, Distelfeld A, Hernandez P, The IWGSC, Budak H (2018) Chromosome-based survey sequencing reveals the genome organization of wild wheat progenitor Triticum dicoccoides. Plant Biotechnol. J. 16, 2077-2087; DOI: 10.1111/pbi.12940

Morales F, Pavlovič A, Abadía A, Abadía J (2018) Photosynthesis in poor nutrient soils, in compacted soils, and under drought: including bioenergy and related processes. In: Adams III W.W., Terashima I. (eds.) The Leaf: A Platform for Performing Photosynthesis (Advances in Photosynthesis and Respiration, volume 44), 371-399, Springer Nature

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Ksas B, Légeret B, Ferretti U, Chevalier A, Pospíšil P, Alric J, Havaux M (2018) The plastoquinone pool outside the thylakoid membrane serves in plant photoprotection as a reservoir of singlet oxygen scavengers. Plant Cell Environ., in press; DOI: 10.1111/pce.13202

Prasad A, Balukova A, Pospíšil P (2018) Triplet excited carbonyls and singlet oxygen formation during oxidative radical reaction in skin. Front. Physiol. 9: 1109; DOI: 10.3389/fphys.2018.01109

Ferretti U, Ciura J, Ksas B, Rác M, Sedlářová M, Kruk J, Havaux M, Pospíšil P (2018) Chemical quenching of singlet oxygen by plastoquinols and their oxidation products in Arabidopsis. Plant J. 95, 848–861; DOI: 10.1111/tpj.13993

Sarikurkcu C, Ceylan O, Targan S, Zeljkovic SC (2018) Chemical composition and biological activities of the essential oils of two endemic Nepeta species. Ind Crops Prod. 125, 5-8; DOI: 10.1016/j.indcrop.2018.09.001

Lysenko V, Lazár D, Verduny T (2018) A method of a bicolor fast-Fourier pulse-amplitude modulation chlorophyll fluorometry. Photosynthetica 56, 1447-1452; DOI: 10.1007/s11099-018-0848-y

Bieleszova K, Pařízková B, Kubeš M, Husičková A, Kubala M, QianMa, Sedlářová M, Robert S, Doležal K, Strnad M, Novák O, Žukauskaite A (2018) New fluorescently labeled auxins exhibit promising anti-auxin activity. New Biotechnol., in press, DOI: 10.1016/j.nbt.2018.06.003

Hýlová A, Pospíšil T, Spíchal L, Mateman J.J, Blanco-Ania D, Zwanenburg B (2018) New hybrid type strigolactone mimics derived from plant growth regulator auxin. New Biotechnol., in press; DOI: 10.1016/j.nbt.2018.08.001

Milosavljevic V, Haddad Y, Moulick A, Buchtelova H, Guran R, Pospisil T, Stokowa-Sołtys K, Heger Z, Richtera L, Kopel P, Adam V (2018) Functional Analysis of Novicidin Peptide: Coordinated Delivery System for Zinc via Schiff Base Ligand, Bioconjugate Chem., in press; DOI: 10.1021/acs.bioconjchem.8b00370

Janečková H, Husičková A, Ferretti U, Prčina M, Pilařová E, Plačková L, Pospíšil P, Doležal K, Špundová M (2018) The interplay between cytokinins and light during senescence in detached Arabidopsis leaves. Plant Cell Environ. 41, 1870-1885; DOI: 10.1111/pce.13329

Stolárik T, Nožková V, Nosek L, Pavlovič A (2018) Dark chlorophyll synthesis may provide a potential for shade tolerance as shown by a comparative study with seedlings of European larch (Larix decidua) and Norway spruce (Picea abies). Trees 32, 951-965; DOI: 10.1007/s00468-018-1688-x

Saganová M, Bokor B, Stolárik T, Pavlovič A (2018) Regulation of enzyme activities in carnivorous pitcher plants of the genus Nepenthes. Planta 248, 451-464; DOI: 10.1007/s00425-018-2917-7

Ajani H, Jansa J, Köprülüoğlu C, Hobza P, Kryštof V, Lyčka A, Lepsik M (2018) Imidazo[1,2-c]pyrimidin-5(6H)-one as a novel core of cyclin-dependent kinase 2 inhibitors: Synthesis, activity measurement, docking, and quantum mechanical scoring. J Mol Recognit. 23:e2720; DOI: 10.1002/jmr.2720

Balarynová J, Danihlík J, Fellner M (2018) Changes in plasma membrane aquaporin gene expression under osmotic stress and blue light in tomato. Acta Physiol. Plant. 40, 27-34, DOI:10.1007/s11738-017-2602-7

Bildziukevich U, Rárová L, Šaman D, Wimmer Z (2018) Picolyl amides of betulinic acid as antitumor agents causing tumor cell apoptosis. Eur. J. Med. Chem. 145, 41-50; DOI:10.1016/j.ejmech.2017.12.096

Bon DJYD, Kováč O, Ferugová V, Zálešák F, Pospíšil J (2018) One and Two-Carbon Homologation of Primary and Secondary Alcohols to Corresponding Carboxylic Esters Using β-Carbonyl BT Sulfones as a Common Intermediate. J. Org. Chem. 83, 4990-5001; DOI:10.1021/acs.joc.8b00112

Edwards KD, Takata N, Johansson M, Jurca M, Novák O, Hényková E, Liverani S, Kozarewa I, Strnad M, Millar AJ, Ljung K, Eriksson ME (2018) Circadian clock components control daily growth activities by modulating cytokinin levels and cell division‐associated gene expression in Populus trees. Plant, Cell Environ. 41, 1468-1482; DOI:10.1111/pce.13185

Filek M, Sieprawska A, Oklešťková J, Rudolphi-Skórska E, Biesaga-Kościelniak J, Miszalski Z, Janeczko A (2018) 24-Epibrassinolide as a Modifier of Antioxidant Activities and Membrane Properties of Wheat Cells in Zearalenone Stress Conditions. J Plant Growth Regul. in press; DOI:10.1007/s00344-018-9792-0

Gelová Z, ten Hoopen P, Novák O, Motyka V, Pernisová M, Dabravolski S, Didi V, Tillack I, Oklešťková J, Strnad M, Hause B, Haruštiaková D, Conrad U, Janda L, Hejátko J (2018) Antibody-mediated modulation of cytokinins in tobacco: organ-specific changes in cytokinin homeostasis. J. Exp. Bot. 69, 441-454; DOI:10.1093/jxb/erx426

Hoyerová K, Hošek P, Quareshy M, Li J, Klima P, Kubeš M, Yemm AA, Neve P, Tripathi A, Bennett MJ, Napier RM (2018) Auxin molecular field maps define AUX1 selectivity: many auxin herbicides are not substrates. New Phytol. 217, 1625-1639; DOI:10.1111/nph.14950

Janeczko A, Biesaga-Kościelniak J, Dziurka M, Filek M, Hura K, Jurczyk B, Kula M, Oklešťková J, Novák O, Rudolphi-Skórska E, Skoczowski A (2017) Biochemical and Physicochemical Background of Mammalian Androgen Activity in Winter Wheat Exposed to Low Temperature. J Plant Growth Regul. 37, 199-219; DOI:10.1007/s00344-017-9719-1

Kadlecová A, Jirsa T, Novák O, Kammenga J, Strnad M, Voller J (2018) Natural plant hormones cytokinins increase stress resistance and longevity of Caenorhabditis elegans. Biogerontology 19, 109-120; DOI:10.1007/s10522-017-9742-4

Lenser T, Tarkowská D, Novák O, Wilhelmsson PKI, Bennett T, Rensing SA, Strnad M, Theißen G (2018) When the BRANCHED network bears fruit: How carpic dominance causes fruit dimorphism in Aethionema. Plant J. 94, 352-371; DOI:10.1111/tpj.13861

Liu Q, Vain T, Viotti C, Doyle SM, Tarkowská D, Novák O, Zipfel C, Sitbon F, Robert S, Hofius D (2018) Vacuole Integrity Maintained by DUF300 Proteins Is Required for Brassinosteroid Signaling Regulation. Molecular Plant 11, 553-567; DOI:10.1016/j.molp.2017.12.015

Matsuura HN, Malik S, de Costa F, Yousefzadi M, Mirjalili MH, Arroo R, Bhambra AS, Strnad M, Bonfill M, Fett-Neto AG (2018) Specialized Plant Metabolism Characteristics and Impact on Target Molecule Biotechnological Production. Mol. Biotechnol. 60, 169-183; DOI:10.1007/s12033-017-0056-1

Pavlović I, Pěnčík A, Novák O, Vujčić V, Radić Brkanac S, Lepeduš H, Strnad M, Salopek-Sondi B (2018) Short-term salt stress in Brassica rapa seedlings causes alterations in auxin metabolism. Plant Physiol. Bioch. 125, 74-84; DOI:10.1016/j.plaphy.2018.01.026

Pilařová V, Plachká K, Chrenková L, Najmanová I, Mladěnka P, Švec F, Novák O, Nováková L (2018) Simultaneous determination of quercetin and its metabolites in rat plasma by using ultra-high performance liquid chromatography tandem mass spektrometry. Talanta 185, 71-79; DOI:10.1016/j.talanta.2018.03.033

Plackett ARG, Powers SJ, Phillips AL, Wilson ZA, Hedden P, Thomas SG (2018) The early inflorescence of Arabidopsis thaliana demonstrates positional effects in floral organ growth and meristem patterning. Plant Reprod. 31, 171-191; DOI:10.1007/s00497-017-0320-3

Prát T, Hajný J, Grunewald W, Vasileva M, Molnár G, Tejos R, Schmid M, Sauer M, Friml J (2018) WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity. Plos Genet. 14:e1007177; DOI:10.1371/journal.pgen.1007177

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Moyo M, Aremu AO, Plačková L, Plíhalová L, Pěnčík A, Novák O, Holub J, Doležal K, Staden JV (2018) Deciphering the growth pattern and phytohormonal content in Saskatoon berry (Amelanchier alnifolia) in response to in vitro cytokinin application, New Biotechnol. 42, 85-94; DOI: 10.1016/j.nbt.2018.02.001

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Bečka M, Vilková M, Šoral M, Potočňá I, Breza M, Béres T, Imrich J (2018) Synthesis and isomerization of acridine substituted 1,3-thiazolidin-4-ones and 4-oxo-1,3-thiazolidin-5-ylidene acetates. An experimental and computational study. J Mol Struct. 1154, 152-164; DOI: 10.1016/j.molstruc.2017.10.046

Béres T, Dragull K, Pospíšil J, Tarkowská D, Dančák M, Bíba O, Tarkowski P, Doležal K, Strnad M (2018) Quantitative Analysis of Ingenol in Euphorbia species via Validated Isotope Dilution Ultra-high Performance Liquid Chromatography Tandem Mass Spectrometry. Phytochem. Anal. 29, 23-29; DOI: 10.1002/pca.2711

Moyo M, Amoo SO, Aremu AO, Gruz J, Šubrtová M, Jarošová M, Tarkowski P, Doležal K (2018) Determination of Mineral Constituents, Phytochemicals and Antioxidant Qualities of Cleome gynandra, Compared to Brassica oleracea and Beta vulgaris. Front Chem. 5:128; DOI: 10.3389/fchem.2017.00128

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Nauš J, Lazár D, Baránková B, Arnoštová B (2018) On the source of non-linear light absorbance in photosynthetic samples. Photosynth. Res. 136, 345-355; DOI: 10.1007/s11120-017-0468-6

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Bilyeu K, Škrabišová M, Allen D, Rajcan I, Palmquist DE, Gillen A, Mian R, Jo H (2018) The interaction of the soybean seed high oleic acid oil trait with other fatty acid modifications. J. Am. oil Chem Soc. 95, 39-49; DOI: 10.1002/aocs.12025

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Ilík P, Špundová M, Šicner M, Melkovičová H, Kučerová Z, Krchňák P, Fürst T, Večeřová K, Panzarová K, Benediktyová Z, Trtílek M (2018) Estimating heat tolerance of plants by ion leakage: a new method based on gradual heating. New Phytol. 218, 1278-1287; DOI: 10.1111/nph.15097

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Vaškebová L, Šamaj J, Ovečka M (2018) Single-point ACT2 gene mutation in the Arabidopsis root hair mutant der1-3 affects overall actin organization, root growth and plant development. Annals of Botany, in press, DOI: 10.1093/aob/mcx180

Zhang H, Yu P, Zhao J, Jiang H, Wang H, Zhu Y, Botella M A, Šamaj J, Li C, Lin J (2018) Expression of tomato prosystemin gene in Arabidopsis reveals systemic translocation of its mRNA and confers necrotrophic fungal resistance. New Phytologist 217, 799-812; DOI: 10.1111/nph.14858

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Niu Y, Hu B, Li X, Chen H, Takáč T, Šamaj J, Xu C (2018) Comparative digital gene expression analysis of tissue-cultured plantlets of highly resistant and susceptible banana cultivars in response to Fusarium oxysporum. International Journal of Molecular Sciences 19(2), E350; DOI: 10.3390/ijms19020350

Stirbet A, Lazár D, Kromdijk J, Govindjee (2018) Chlorophyll a fluorescence induction: Can just a one-second measurement be used to quantify abiotic stress responses? Photosynthetica 56, 86-104; DOI: 10.1007/s11099-018-0770-3

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Yokawa K, Kagenishi T, Pavlovič A, Gall S, Weiland M, Mancuso S, Baluška F (2018) Anaesthetics stop diverse plant organ movements, affect endocytic vesicle recycling and ROS homeostasis, and block action potentials in Venus flytraps. Ann. Bot.-London; in press; DOI: 10.1093/aob/mcx155

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Pavlovič A, Jakšová J, Novák O (2017) Triggering a false alarm: wounding mimics prey capture in the carnivorous Venus flytrap (Dionaea muscipula). New Phytol. 216: 927-938; DOI: 10.1111/nph.14747

Perfahl S, Bodtke A, Prachařová J, Kašpárková J, Brabec V, Stürup S, Schulzke C, Cuadrado J, Bednarski PJ (2017) Preparation of bis(5-phenyltetrazolato) Pt(II) and Pt(IV) analogues of transplatin and in vitro evaluation for antitumor activity. Inorg. Chim. Acta 456, 86-94; DOI: 10.1016/j.ica.2016.11.017

Novohradský V, Zanellato I, Marzano Ch, Prachařová J, Kašpárková J, Gibson D, Gandin V, Osella D, Brabec V (2017) Epigenetic and antitumor effects of platinum(IV)-octanoato conjugates. Sci. Rep. 7:3751; DOI: 10.1038/s41598-017-03864-w

Yadav KNS, Semchonok DA, Nosek L, Kouřil R, Fucile G, Boekema EJ, Eichacker LA (2017) Supercomplexes of plant photosystem I with cytochrome b6f, light-harvesting complex II and NDH. BBA-Bioenergetics 1858, 12-20; DOI: 10.1016/j.bbabio.2016.10.006

Šeflová J, Čechová P, Biler M, Kubala M, Hradil P (2017) Inhibition of Na+K+-ATPase by 5,6,7,8- tetrafluoro-3-hydroxyquinolin-4(1H)-one, Biochimie 138, 56-61; DOI: 10.1016/j.biochi.2017.04.009

Ilik P, Pavlovič A, Kouřil R, Alboresi A, Morosinotto T, Allahverdieyeva Y, Aro E.M, Yamamoto H, Shikanai T (2017) Alternative electron transport mediated by flavodiiron proteins is operational in organisms from cyanobacteria up to gymnosperms. New Phytol. 214, 967-972; DOI: 10.1111/nph.14536

Kale R, Hebert EH, Frankel LK, Sallans L, Bricker TM, Pospíšil P (2017) Amino acid oxidation of the D1 and D2 proteins by oxygen radicals during photoinhibition of Photosystem II. Proc. Natl. Acad. Sci. U.S.A. 114, 2988-2993; DOI: 10.1073/pnas.1618922114

Stolárik T, Hedtke B, Šantrůček J, Ilík P, Grimm B, Pavlovič A (2017) Transcriptional and post-translational control of chlorophyll biosynthesis by dark-operative protochlorophylide oxidoreductase in Norway spruce. Photosynth. Res. 132, 165-179; DOI: 10.1007/s11120-017-0354-2

Nosek L, Semchonok D, Boekema EJ, Ilík P, Kouřil R (2017) Structural variability of plant photosystem II megacomplexes in thylakoid membranes. Plant J. 89, 104-111; DOI: 10.1111/tpj.13325

Takáč T, Bekešová S, Šamaj J (2017) Actin depolymerization-induced changes in proteome of Arabidopsis roots. J. Proteomics 153, 89-99; DOI: 10.1016/j.jprot.2016.06.010

Pospíšil P, Yamamoto Y (2017) Damage to photosystem II by lipid peroxidation products. Biochimica et Biophysica Acta - General Subjects 1861, 457-466; DOI: 10.1016/j.bbagen.2016.10.005

Krausko M, Perutka Z, Šebela M, Šamajová O, Šamaj J, Novák O, Pavlovič A (2017) The role of electrical and jasmonate signaling in recognition of captured prey in carnivorous sundew plant Drosera capensis. New Phytol. 213, 1818-1835; DOI: 10.1111/nph.14352

Lyu H, Lazár D (2017) Modeling the light-induced electric potential difference ΔΨ across the thylakoid membrane based on the transition state rate theory. Biochim. Biophys. Acta - Bioenerg. 1858, 239-248; DOI: 10.1016/j.bbabio.2016.12.009

Lyu H, Lazár D (2017) Modeling the light-induced electric potential difference (ΔΨ), the pH difference (ΔpH) and the proton motive force across the thylakoid membrane in C3 leaves. J. Theor. Biol. 413, 11-23; DOI: 10.1016/j.jtbi.2016.10.017

Krasylenko YA, Janošíková K, Kukushkin OV (2017) Juniper dwarf mistletoe (Arceuthobium oxycedri) in the Crimean peninsula: novel insights into its morphology, hosts and distribution. Botany 95, 897-911; DOI: 10.1139/cjb-2016-0289

Yu M, Liu H, Dong Z, Xiao J, Su B, Fan L, Komis G, Šamaj J , Lin J, Li R (2017) The dynamics and endocytosis of Flot1 protein in response to flg22 in Arabidopsis. J. Plant Physiol. 215, 73-84; DOI: 10.1016/j.jplph.2017.05.010

Wu Y, Fan W, Li X, Chen H, Takáč T, Šamajová O, Fabrice MR, Xie L, Ma J, Šamaj J, Xu C (2017) Expression and distribution of extensins and AGPs in susceptible and resistant banana cultivars in response to wounding and Fusarium oxysporum. Sci. Rep. 7: 42400; DOI: 10.1038/srep42400

Latrasse D, Jégu T, Li H, de Zelicourt A, Raynaud C, Legras S, Gust A, Šamajová O, Veluchamy A, Rayapuram N, Ramirez-Prado JS, Kulikova O, Colcombet J, Bigeard J, Genot B, Bisseling T, Benhamed M, Hirt H (2017) MAPK-triggered chromatin reprogramming by histone deacetylase in plant innate immunity. Genome Biol. 18:131; DOI: 10.1186/s13059-017-1261-8

Takáč T, Šamajová O, Šamaj J (2017) Integrating cell biology and proteomic approaches in plants. J. Proteomics 169, 165-175; DOI: 10.1016/j.jprot.2017.04.020

Luptovčiak I, Samakovli D, Komis G, Šamaj J (2017) KATANIN 1 is essential for embryogenesis and seed formation in Arabidopsis. Front. Plant Sci. 8:728; DOI: 10.3389/fpls.2017.00728

Luptovčiak I, Komis G, Takáč T, Ovečka M, Šamaj J (2017) Katanin: a sword cutting microtubules for cellular, developmental, and physiological purposes. Front. Plant Sci. 8:1982; DOI: 10.3389/fpls.2017.01982

Komis G, Luptovčiak I, Ovečka M, Samakovli D, Šamajová O, Šamaj J (2017) Katanin effects on dynamics of cortical microtubules and mitotic arrays in Arabidopsis thaliana revealed by advanced live-cell imaging. Front. Plant Sci. 8:866; DOI: 10.3389/fpls.2017.00866

Vyplelová P, Ovečka M, Šamaj J (2017) Alfalfa root growth rate correlates with progression of microtubules during mitosis and cytokinesis as revealed by environmental light-sheet microscopy. Front. Plant Sci. 8:1870; DOI: 10.3389/fpls.2017.01870

Takáč T, Šamajová O, Luptovčiak I, Pechan T, Šamaj J (2017) Feedback microtubule control and microtubule-actin cross-talk in Arabidopsis revealed by integrative proteomic and cell biology analysis of KATANIN 1 mutants. Mol. Cell. Proteomics 16, 1591-1609; DOI: 10.1074/mcp.M117.<wbr />068015

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Křupka M, Mašek J, Barkocziová L, Knotigová PT, Kulich P, Plocková J, Lukač R, Bartheldyová E, Koudelka Š, Chaloupková R, Šebela M, Zyka D, Droz L, Effenberg R, Ledvina M, Miller AD, Turánek J, Raška M (2016) The Position of His-Tag in Recombinant OspC and Application of Various Adjuvants Affects the Intensity and Quality of Specific Antibody Response after Immunization of Experimental Mice. Plos One 11, e0148497; DOI: 10.1371/journal.pone.0148497

Malik S, Bhushan S, Sharma M, Ahuja PS (2016) Biotechnological approaches to the production of shikonins: a critical review with recent updates. Crit. Rev Biotechnol. 36, 327-340; DOI: 10.3109/07388551.2014.961003

Simon S, Skupa P, Viaene T, Zwiewka M, Tejos R, Klíma P, Carna M, Rolčík J, De Rycke R, Moreno I, Dobrev PI, Orellana A, Zažímalová E, Friml J (2016) PIN6 auxin transporter at endoplasmic reticulum and plasma membrane mediates auxin homeostasis and organogenesis in Arabidopsis. New Phytol. 211; 65-74; DOI: 10.1111/nph.14019

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Semina E, Zukauskaite A, Sackus A, De Kimpe N, Mangelinckx S (2016) Selective Elaboration of Aminodiols towards Small Ring alpha- and beta-Amino Acid Derivatives that Incorporate an Aziridine, Azetidine, or Epoxide Scaffold. Eur. J. Org. Chem. 9, 1720-1731; DOI: 10.1002/ejoc.201600036

Shorinola O, Bird N, Simmonds J, Berry S, Henriksson T, Jack P, Werner P, Gerjets T, Balcárková B, Valárik M, Holdsworth MJ, Flintham J, Uauy C (2016) The wheat Phs-A1 pre-harvest sprouting resistance locus delays the rate of seed dormancy loss and maps 0.3 cM distal to the PM19 genes in UK germplasm. J. Exp. Bot. 67, 4169-4178; DOI: 10.1093/jxb/erw194

Sinha RK, Pospíšil P, Maheshwari P, Eudes F (2016) Bcl-2 Delta 21 and Ac-DEVD-CHO Inhibit Death of Wheat Microspores. Front Plant Sci 7: 1931; DOI: 10.3389/fpls.2016.01931

Staňková H, Hastie AR, Chan S, Vrána J, Tulpová Z, Kubaláková M, Visendi P, Hayashi S, Luo MC, BAtley J, Edwards D, Doležel J, Šimková H (2016) BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes. Plant Biotechnol. J. 14; 1523-1531; DOI: 10.1111/pbi.12513

Vallverdu-Queralt A, Biler M, Meudec E, Le Guerneve C, Vernhet A, Mazauric JP, Legras JL, Loonis M, Trouillas P, Cheynier V, Dangles O (2016) p-Hydroxyphenyl-pyranoanthocyanins: An Experimental and Theoretical Investigation of Their Acid-Base Properties and Molecular Interactions. Int. J. Mol. Sci. 17: 1842; DOI: 10.3390/ijms17111842

Rosero A, Oulehlová S, Stillerová L, Schieberotvá P, Grunt M, Žárský V, Cvrčková F (2016) Arabidopsis FH1 Formin Affects Cotyledon Pavement Cell Shape by Modulating Cytoskeleton Dynamics. Plant Cell Physiol. 57, 488-504; DOI: 10.1093/pcp/pcv209

Samec D, Valek-Zulj L, Martinez S, Grúz J, Piljac A, Piljac-Zegarac J (2016) Phenolic acids significantly contribute to antioxidant potency of Gynostemma pentaphyllum aqueous and methanol extracts. Ind. Crop. Prod. 84, 104-107; DOI: 10.1016/j.indcrop.2016.01.035

Sanchez-Martin J, Steuernagel B, Ghosh S, Herren G, Hurni S, Adamski N, Vrána J, Kubaláková M, Krattinger SG, Wicker T, Doležel J, Keller B, Wulff BBH (2016) Rapid gene isolation in barley and wheat by mutant chromosome sequencing. Genome Biol. 17:221; DOI: 10.1186/s13059-016-1082-1

Sardos J, Rouard m, Hueber Y, Cenci A, Hyma KE, van den Houwe I, Hřibová E, Courtois B, Roux N (2016) A Genome-Wide Association Study on the Seedless Phenotype in Banana (Musa spp.) Reveals the Potential of a Selected Panel to Detect Candidate Genes in a Vegetatively Propagated Crop. Plos One 11, e0154448; DOI: 10.1371/journal.pone.0154448

Molnár I, Vrána J, Burešová V, Cápal P, Farkaš A, Darko E, Cseh A, Kubaláková M, Molnar-Lang M, Doležel J (2016) Dissecting the U, M, S and C genomes of wild relatives of bread wheat (Aegilops spp.) into chromosomes and exploring their synteny with wheat. Plant J 88, 452-467; DOI: 10.1111/tpj.13266

Patel RV, Mistry B, Syed R, RAthi Ak, Lee YJ, Sung JS, Shinf HS, Keum YS (2016) Chrysin-piperazine conjugates as antioxidant and anticancer agents. Eur. J. Pharm. Sci 88, 166-177; DOI: 10.1016/j.ejps.2016.02.011

Petrik M, Zhai CY, Nový Z, Urbánek L, Haas H, Decristoforo C (2016) In Vitro and In Vivo Comparison of Selected Ga-68 and Zr-89 Labelled Siderophores. Mol. Imaging Biol. 18, 344-352; DOI: 10.1007/s11307-015-0897-6

Pospíšil P (2016) Production of Reactive Oxygen Species by Photo system II as a Response to Light and Temperature Stress. Front Plant Sci. 7, 1951-1951; DOI: 10.3389/fpls.2016.01950

Margaritopoulou T, Kryovrysanaki N, Megkoula P, Prassinos C, Samakovli D, Milioni D, Hatzopoulos P (2016) HSP90 canonical content organizes a molecular scaffold mechanism to progress flowering. Plant J. 87; 174-187; DOI: 10.1111/tpj.13191

Martin G, Baurens FC, Droc G, Rouard M, Cenci A, Kilian A, Hastie A, Doležel J, Aury JM, Alberti A, Carreel F, D´Hont A (2016) Improvement of the banana "Musa acuminata" reference sequence using NGS data and semi-automated bioinformatics methods. BMC GENOMICS 17:243; DOI: 10.1186/s12864-016-2579-4

Miguel A, Milhinhos A, Novák O, Jones B, Miquel CM (2016) The SHORT-ROOT-like gene PtSHR2B is involved in Populus phellogen aktivity. J. Exp. Bot 67, 1545-1555; DOI: 10.1093/jxb/erv547

Koo DH, Tiwari VK, Hřibová E, Doležel J, Friebe B, Gill BS (2016) Molecular Cytogenetic Mapping of Satellite DNA Sequences in Aegilops geniculata and Wheat. Cytogenet. Genome Res. 148, 314-321; DOI: 10.1159/000447471

Kovačík J, Grúz J, Bíba O, Hedbavny J (2016) Content of metals and metabolites in honey originated from the vicinity of industrial town Kosice (eastern Slovakia). Environ. Sci. Pollutr. R. 23, 4531-4540; DOI: 10.1007/s11356-015-5627-8

Kagy V, Wong M, Vandenbroucke H, Jenny C, Dubois C, Ollivier A, Cardi C, Mournet P, Tuia V, Roux N, Doležel J, Perrier X (2016) Traditional Banana Diversity in Oceania: An Endangered Heritage. Plos One 11, e0151208; DOI: 10.1371/journal.pone.0151208

Komínková E, Dreiseitl A, Malečková E, Doležel J, Valárik M (2016) Genetic Diversity of Blumeria graminis f. sp hordei in Central Europe and Its Comparison with Australian Population. Plos One 11, e0167099; DOI: 10.1371/journal.pone.0167099

Ivaničová Z, Jakobson I, Reis D, Šafář J, Milec Z, Abrouk M, Doležel J, Jarve K, Valárik M (2016) Characterization of new allele influencing flowering time in bread wheat introgressed from Triticum militinae. New Biotechnol 33, 718 -727; DOI: 10.1016/j.nbt.2016.01.008

Gruszka D, Janeczko A, Dziurka M, Pociecha E, Oklešťkova J, Szarejko I (2016) Barley Brassinosteroid Mutants Provide an Insight into Phytohormonal Homeostasis in Plant Reaction to Drought Stress. Front Plant Sci. 7: 1824; DOI: 10.3389/fpls.2016.01824

Hřibová E, Holušová K, Trávníček P, Petrovská B, Ponert J, Šimková H, Kubátová B, Jeršáková J, Curn V, Suda J, Doležel J, Vrána J (2016) The Enigma of Progressively Partial Endoreplication: New Insights Provided by Flow Cytometry and Next-Generation Sequencing. Genome Biol. Evol. 8, 1996-2005; DOI: 10.1093/gbe/evw141

Evtushenko EV, Levitsky VG, Elisafenko EA, Gunbin KV, Belousov AI, Šafář J, Doležel J, Vershinin AV (2016) The expansion of heterochromatin blocks in rye reflects the co-amplification of tandem repeats and adjacent transposable elements. BMC Genomics 17: 337; DOI: 10.1186/s12864-016-2667-5

Sosvorová LK, Sarek J, Vitku J, Kvasnica M (2016) Synthesis of 3 alpha-deuterated 7 alpha-hydroxy-DHEA and 7-oxo-DHEA and application in LC-MS/MS plasma analysis. Steroids 112, 88-94; DOI: 10.1016/j.steroids.2016.05.001

Visendi P, Berkman , Hayashi S, Golicz A, Bayer P, Ruperao P, Hurgobin B, Montenegro J, Chan Chon-Kit K, Staňková H, Batley J, Šimková H, Doležel J, Edwards D (2016) An efficient approach to BAC based assembly of complex genomes. Plant Methods 12:2; DOI: 10.1186/s13007-016-0107-9

Vlčková H, Svoboda P, Novák O, Solich P, Nováková L (2016) Development of MEPS-UHPLC-MS/MS multistatin methods for clinical analysis. Bioanalysis 8, 333-349; DOI: 10.4155/bio.15.245

Wasternack C, Strnad M (2016) Jasmonate signaling in plant stress responses and development - active and inactive compounds. New Biotechnol. 33, 604-613; DOI: 10.1016/j.nbt.2015.11.001

Čudejková MM, Vojta P, Valík J, Galuszka P (2016) Quantitative and qualitative transcriptome analysis of four industrial strains of Claviceps purpurea with respect to ergot alkaloid production. New Biotechnol. 33, 743-754; DOI: 10.1016/j.nbt.2016.01.006

Colak N, Torun H, Grúz J, Strnad M, Šubrtová M, Inceer H, Ayaz FA (2016) Comparison of Phenolics and Phenolic Acid Profiles in Conjunction with Oxygen Radical Absorbing Capacity (ORAC) in Berries of Vaccinium arctostaphylos L. and V. myrtillus L. Pol. J. Food Nutr. 66, 85-91; DOI: 10.1515/pjfns-2015-0053

Colak N, Torun H, Grúz, Strnad M, Hermosin-Gutierrez I, Hayirlioglu-Ayaz S, Ayaz FA (2016) Bog bilberry phenolics, antioxidant capacity and nutrient profile. Food Chem. 201, 339-349; DOI: 10.1016/j.foodchem.2016.01.062

Cápal P, Endo T, Vrána J, Kubalákova M, Karafiátova M, Komínkova E, Mora-Ramirez I, Weschke W, Doležel J (2016) The utility of flow sorting to identify chromosomes carrying a single copy transgene in wheat. Plant Methods 12:24, DOI: 10.1186/s13007-016-0124-8

Boldizsar A, Vaňkova R, Novak A, Kalapos B, Gulyas Z, Pal M, Floková K, Janda T, Galiba G, Kocsy G (2016) The mvp2 mutation affects the generative transition through the modification of transcriptome pattern, salicylic acid and cytokinin metabolism in Triticum monococcum. K. Plant Physiol 202, 21-33; DOI: 10.1016/j.jplph.2016.07.005

Aremu AO, Plackova L, Grúz J, Biba O, Novák O, Stirk WA, Doležal K, Van Staden J (2016) Seaweed-Derived Biostimulant (Kelpak (R)) Influences Endogenous Cytokinins and Bioactive Compounds in Hydroponically Grown Eucomis autumnalis. J. Plant Growth Regul 35, 151-162; DOI: 10.1007/s00344-015-9515-8

Bar M, Israeli A, Levy M, Ben Gera H, Jiménez-Gómez JM, Kouril S, Tarkowski P, Ori N (2016) CLAUSA Is a MYB Transcription Factor That Promotes Leaf Differentiation by Attenuating Cytokinin Signaling. Plant Cell 28, 1602-1615; DOI: 10.1105/tpc.16.00211

Dudáš M, Vilková M, Béres T, Repčák M, Mártonfi P (2016) Two New Isomers of Palmityl-4-hydroxycinnamate from Flowers of Taxaracum Species. Nat. Prod. Commun. 11, 837-840

Steiner E, Livne S, Kobinson-Katz T, Tal L, Pri-Tal O, Mosquna A, Tarkowská D, Mueller B, Tarkowski P, Weiss D (2016) The Putative O-Linked N-Acetylglucosamine Transferase SPINDLY Inhibits Class I TCP Proteolysis to Promote Sensitivity to Cytokinin. Plant Physiol. 171, 1485-1494; DOI: 10.1104/pp.16.00343

Vidic D, Ćavar Zeljković S, Dizdar M, Maksimović M (2016) Essential oil composition and antioxidant activity of four Asteraceae species from Bosnia, J. Essent. Oil Res. 28, 445-457; DOI: 10.1080/10412905.2016.1150216

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Halouzka R., Tarkowski P, Ćavar Zeljković S (2016) Characterization of Phenolics and other Quality Parameters of Different Types of Honey. Czech J. Food Sci. 34, 244-253; DOI: 10.17221/321/2015-CJFS

Dušková E, Dušek K, Indrák P, Smékalová K (2016) Postharvest changes in essential oil content and quality of lavender flowers. Ind. Crop. Prod. 79, 225-231; DOI: 10.1016/j.indcrop.2015.11.007

Sochor M, Trávníček B (2016) Melting pot of biodiversity: first insights into the evolutionary patterns of the Colchic bramble flora (Rubus subgenus Rubus). Bot. J. Linn. Soc. 181, 610-620; DOI: 10.1111/boj.12436

Velebil J, Trávníček B, Sochor M, Havlíček P (2016) Five new bramble species (Rubus, Rosaceae) in the flora of the Czech Republic. Dendrobiology 75, 141-155; DOI: 10.12657/denbio.075.014

Rýdlová J, Jelínková M, Dušek K, Dušková E, Vosátka M, Puschel D (2016) Arbuscular mycorrhiza differentially affects synthesis of essential oils in coriander and dill. Mycorrhiza 26, 123-131; DOI:10.1007/s00572-015-0652-5

Drábek J, Smolíková M, Kalendar R, Lopes Pinto FA, Pavloušek P, Klepárník K, Frébort I (2016) Design and validation of an STR hexaplex assay for DNA profiling of grapevine cultivars. Electrophoresis 37, 3059-3067; DOI: 10.1002/elps.201600068

Šmehilová M, Dobrůšková J, Novák O, Takáč T, Galuszka P (2016) Cytokinin-specific glycosyltransferases possess different roles in cytokinin homeostasis maintenance. Front Plant Sci. 7:1264; DOI: 10.3389/fpls.2016.01264

Šamaj J, Frébort I (2016) Plant Biotechnology: Green for Good III New Biotechnol. 33, 593; DOI: 10.1016/j.nbt.2016.04.004

Kokáš F, Vojta P, Galuszka P (2016) Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering. Data in Brief 8, 334-341; DOI:10.1016/j.dib.2016.05.051

Hloušková P, Bergougnoux V (2016) A subtracted cDNA library identifies genes up-regulated during PHOT1-mediated early step of de-etiolation in tomato (Solanum lycopersicum L.). BMC Genomics 17:291; DOI:10.1186/s12864-016-2613-6

Hinsch J, Galuszka P, Tudzynski P (2016) Functional characterization of the first filamentous fungal tRNA-isopentenyltransferase and its role in the virulence of Claviceps purpurea. New Phytol. 211, 980-992; DOI:10.1111/nph.13960

Majeská Čudejková M, Vojta P, Valík J, Galuszka P (2016) Quantitative and qualitative transcriptome analysis of four industrial strains of Claviceps purpurea with respect to ergot alkaloid production. New Biotechnol. 33, 743-754; DOI:10.1016/j.nbt.2016.01.006

Zwanenburg B, Ćavar Zeljković Z, Pospíšil T (2016) Synthesis of strigolactones, a strategic account. Pest. Manag. Sci. 72, 15-29; DOI: 10.1002/ps.4105

Zwanenburg B, Pospíšil T, Ćavar Zeljković Z (2016) Strigolactones: new plant hormones in action. Planta 243, 1311-1326; DOI:10.1007/s00425-015-2455-5

Zhang S, Ulrich M, Gromnicka A, Havlíček L, Kryštof V, Jorda R, Strnad M, Vollmar AM, Zahler S (2016) Anti-angiogenic effects of novel cyclin-dependent kinase inhibitors with a pyrazolo[4,3-d]pyrimidine scaffold. Brit. J. Pharmacol. 173, 2645-2656; DOI: 10.1111/bph.13546

Wróbel TM, Kiełbus M, Kaczor AA, Kryštof V, Karczmarzyk Z, Wysocki W, Fruziński A, Król SK, Grabarska A, Stepulak A, Matosiuk D (2016) J. Enzyme Inhib. Med. Chem. 31,608-18; DOI: 10.3109/14756366.2015.1057716

Vymětalová L, Havlíček L, Šturc A, Skrášková Z, Jorda R, Pospíšil T, Strnad M, Kryštof V (2016) 5-Substituted 3-isopropyl-7-[4-(2-pyridyl)benzyl]amino-1(2)H-pyrazolo[4,3-d]pyrimidines with anti-proliferative activity as potent and selective inhibitors of cyclin-dependent kinases. Eur. J. Med. Chem. 110, 291-301; DOI: 10.1016/j.ejmech.2016.01.011

von Schwartzenberg K, Lindner AC, Gruhn N, Šimura J, Novák O, Strnad M, Gonneau M, Nogué F, Heyl A (2016) CHASE domain-containing receptors play an essential role in the cytokinin response of the moss Physcomitrella patens. J Exp Bot. 67, 667-679; DOI: 10.1093/jxb/erv479

Vlk M, Micolova P, Urban M, Kvasnica M, Saman D, Sarek J (2016) 15N-labelled pyrazines of triterpenic acids. J. Radioanal. Nucl. Chem. 308, 733-739; DOI: 10.1007/s10967-015-4479-5

Vojta P, Kokáš F, Husičková A, Grúz J, Bergougnoux V, Marchetti CF, Jiskrová E, Ježilová E, Mik V, Ikeda Y, Galuszka P (2016) Whole transcriptome analysis of transgenic barley with altered cytokinin homeostasis and increased tolerance to drought stress. New Biotechnol. 33, 676-691; DOI:10.1016/j.nbt.2016.01.010

Tarkowská D, Novák O, Oklesťková J, Strnad M (2016) The determination of 22 natural brassinosteroids in a minute sample of plant tissue by UHPLC-ESI-MS/MS. Anal. Bioanal. Chem. 408, 6799-6812; DOI: 10.1007/s00216-016-9807-2

Tarkowská D, Strnad M (2016) Plant ecdysteroids: plant sterols with intriguing distributions, biological effects and relations to plant hormones (2016) PLANTA 244, 545-555; DOI: 10.1007/s00425-016-2561-z

Šimura J, Spíchal L, Adamec L, Pěnčík A, Rolčík J, Novák O, Strnad M (2016) Cytokinin, auxin and physiological polarity in the aquatic carnivorous plants Aldrovanda vesiculosa and Utricularia australis. Annals of Botany 117, 1037-1044; DOI: 10.1093/aob/mcw020

Sidoryk K, Korda A, Rárová L, Oklešťková J, Pakulski Z, Strnad M, Cmoch P, Gwardiak K, Karczewski R (2016) Synthesis and Cytotoxicity of 28a-Homothiolupanes and 28a-Homothiolupane Saponins. Eur. J. Org. Chem. 2016, 373-383; DOI: 10.1002/ejoc.201501147

Sidoryk K, Cmoch P, Rárová L, Oklešťková J, Pakulski Z, Strnad M (2016) Synthesis of S-(28a-homobetulin-28a-yl) thiophosphate, thiophosphonate, and thiophosphinate. Phosphorus Sulfur Silicon Relat. Elem. 191, 1240-1244; DOI: 10.1080/10426507.2016.1165679

Sidoryk K, Rárová L, Oklešťková J, Pakulski Z, Strnad M, Cmoch P, Luboradzki R (2016) Synthesis of 28a-homoselenolupanes and 28a-homoselenolupane saponins . Org. Biomol. Chem. 14, 10238-10248; DOI:10.1039/C6OB01938B

Shahnejat-Bushehri A, Tarkowska D, Sakuraba Y, Balazadeh S (2016) Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat. Plants 2, 16013 DOI: 10.1038/nplants.2016.13

Sánchez-López ÁM, Baslam M, De Diego N, Muñoz FJ, Bahaji A, Almagro G, Ricarte-Bermejo A, García-Gómez P, Li J, Humplík JF, Novák O, Spíchal L, Doležal K, Baroja-Fernández E, Pozueta-Romero J (2016) Volatile compounds emitted by diverse phytopathogenic microorganisms promote plant growth and flowering through cytokinin action. Plant, Cell & Environment 39, 2592-2608; DOI:10.1111/pce.12759

Sánchez-López ÁM, Bahaji A, De Diego N, Baslam M, Li J, Muñoz FJ, Almagro G, García-Gómez P, Ameztoy K, Ricarte-Bermejo A, Novák O, Humplík JF, Spíchal L, Doležal K, Ciordia S, Mena MC, Navajas R, Baroja-Fernández E, Pozueta-Romero J (2016) Arabidopsis Responds to Alternaria alternata Volatiles by Triggering Plastid Phosphoglucose Isomerase-Independent Mechanis. Plant Physiol. 172, 1989-2001; DOI:10.1104/pp.16.00945

Roche J, Love J, Guo Q, Song J, Cao M, Fraser K, Jones C, Novák O, Turnbull MH, Jameson PE (2016) Metabolic changes and associated cytokinin signals in response to nitrate assimilation in roots and shoots of Lolium perenne. Physiol. Plantarum 156, 497-511; DOI: 10.1111/ppl.12412

Roman H, Girault T, Barbier F, Péron T, Brouard N, Pencik A, Novak O, Vian A, Sakr S, Lothier J, Le Gourrierec J, Leduc N (2016) Cytokinins are initial targets of light in the control of bud outgrowth. Plant Physiol. 172, 489-509; DOI:10.1104/pp.16.00530

Porco S, Pěnčík A, Rashed A, Voß U, Casanova-Sáez R, Bishopp A, Golebiowska A, Bhosale R., Swarup R, Swarup K, Peňáková P, Novák O, Staswick P, Hedden P, Phillips AL, Vissenberg K, Bennett MJ, Ljung K (2016) The dioxygenase-encoding AtDAO1 gene controls IAA oxidation and homeostasis in Arabidopsis. P. Natl. Acad. Sci. USA 113, 11016-11021; DOI:10.1073/pnas.1604375113

Pospíšilová H, Jiskrová E, Vojta P, Mrízová K, Kokáš F, Majeská Čudejková M, Bergougnoux V, Plíhal O, Klimešová J, Novák O, Dzurová L, Frébort I, Galuszka P (2016) Transgenic barley overexpressing a cytokinin dehydrogenase gene shows greater tolerance to drought stress. New Biotech. 33, 692-705; DOI:10.1016/j.nbt.2015.12.005

Pociecha E, Dziurka M, Oklešťková J, Janeczko A (2016) Brassinosteroids increase winter survival of winter rye (Secale cereale L.) by affecting photosynthetic capacity and carbohydrate metabolism during the cold acclimation process. Plant Growth Regul. 18, 1-9; DOI: 10.1007/s10725-016-0149-z

Plíhalová L, Vylíčilová H, Doležal K, Zahajská L, Zatloukal M, Strnad M (2016) Synthesis of aromatic cytokinins for plant biotechnology. New Biotechnol. 33, 614-624; DOI:10.1016/j.nbt.2015.11.009

Pilařová V, Gottvald T, Svoboda P, Benešová K, Běláková S, Novák O, Nováková L (2016) Development and optimization of ultra-high performance supercritical fluid chromatography mass spectrometry method for high-throughput determination of tocopherols and tocotrienols in human serum. Anal. Chim. Acta 934, 252-265; DOI:10.1016/j.aca.2016.06.008

Pacheco-Villalobos D, Díaz-Moreno SM, van der Schuren A, Tamaki T, Kang YH, Gujas B, Novak O, Jaspert N, Li Z, Wolf S, Oecking C, Ljung K, Bulone V, Hardtke CS (2016) The Effects of High Steady State Auxin Levels on Root Cell Elongation in Brachypodium. Plant Cell 28, 1009-1024; DOI:10.1105/tpc.16.01057

Nisler J, Kopečný D, Končitíková R, Bazgier V, Berka K, Zalabák D, Briozzo P, Strnad M (2016) Novel thidiazuron-derived inhibitors of cytokinin oxidase/dehydrogenase. Plant Mol. Biol. 92, 235-248; DOI: 0.1007/s11103-016-0509-0

Otto M, Naumann C, Brandt W, Wasternack C, Hause B (2016) Activity Regulation by Heteromerization of Arabidopsis Allene Oxide Cyclase Family Members. Plants 5, 3; DOI: 10.3390/plants5010003

Martín-Rodríguez JA, Huertas R, Ho-Plágaro T, Ocampo JA, Turečková V, Tarkowská D, Ludwig-Müller J, García-Garrido JM (2016) Gibberellin-Abscisic Acid Balances during Arbuscular Mycorrhiza Formation in Tomato. Front. Plant Sci., in press; DOI:10.3389/fpls.2016.01273

Morzycki JW, Rárová L, Grúz J, Sawczuk T, Kiełczewska U, Siergiejczyk L, Wojtkielewicz A (2016) Synthesis of aromatic retinoids and curcuminoids and evaluation of their antiproliferative, antiradical and anti-inflammatory activities. ChemistryOpen 5, 339-350. DOI: 10.1002/open.201600027

Leljak-Levanić D, Mrvková M, Turečková V, Pěnčík A, Rolčík J, Strnad M, Mihaljević S (2016) Hormonal and epigenetic regulation during embryogenic tissue habituation in Cucurbita pepo L. Plant Cell Rep. 35, 77-89; DOI: 10.1007/s00299-015-1869-7

Malinowksi R, Novák O, Borhan MH, Spíchal L, Strnad M, Rolfe SA (2016) The role of cytokinins in clubroot disease. Eur. J. Plant Pathol. 145, 543-557; DOI:10.1007/s10658-015-0845-y

Lamie PF, Ali WAM, Bazgier V, Rárová L (2016) Novel N-substituted indole Schiff bases as dual inhibitors of cyclooxygenase-2 and 5-lipoxygenase enzymes: Synthesis, biological activities in vitro and docking study. Eur. J. Med. Chem. 123, 803-813; DOI: 10.1016/j.ejmech.2016.08.013

Kučera L, Fanali S, Aturki Z, Pospíšil T, Bednář P (2016) Comparison of nano and conventional liquid chromatographic methods for the separation of (+)-catechin-ethyl-malvidin-3-glucoside diastereoisomers. J. Chromatogr. A 1428, 126-133; DOI: 10.1016/j.chroma.2015.09.074

Kvasnica M, Oklestkova J, Bazgier V, Rárová L, Korinkova P, Mikulik J, Budesinsky M, Beres T, Berka K, Lu Q, Russinova E, Strnad M (2016) Design, synthesis and biological activities of new brassinosteroid analogues with phenyl group in the side chain. Org. Biomol. Chem. 14, 8691-8701; DOI: 10.1039/C6OB01479H

Korovetská K, Novák O, Turečková V, Hájíčková M, Gloser V (2016) Signalling mechanisms involved in the response of two varieties of Humulus lupulus L. to soil drying: II. changes in the concentration of abscisic acid catabolites and stress-induced phytohormones. Plant Growth Regul. 78, 13-20; DOI:10.1007/s10725-015-0058-6

Kolatorova Sosvorova L, Sarek J, Vitku J, Kvasnica M (2016) Synthesis of 3α-deuterated 7α-hydroxy-DHEA and 7-oxo-DHEA and application in LC-MS/MS plasma analysis. Steroids 112, 88-94; DOI: 10.1016/j.steroids.2016.05.001

Koprna R, De Diego N, Dundálková L, Spíchal L (2016) Use of Cytokinins as Agrochemicals. Bioorgan. Med. Chem. 24, 484-492; DOI: 10.1016/j.bmc.2015.12.022

Jiskrová E, Novák O, Pospíšilová H, Holubová K, Karády M, Galuszka P, Robert S, Frébort I (2016) Extra- and intracellular distribution of cytokinins in the leaves of monocots and dicots. New Biotech. 33, 735-742; DOI:10.1016/j.nbt.2015.12.010

Hluska T, Dobrev PI, Tarkowská D, Frébortová J, Zalabák D, Kopečný D, Plíhal O, Kokáš F, Briozzo P, Zatloukal M, Motyka V, Galuszka P (2016) Cytokinin metabolism in maize: Novel evidence of cytokinin abundance, interconversions and formation of a new trans-zeatin metabolic product with a weak anticytokinin activity. Plant Sci. 247, 127-137; DOI:10.1016/j.plantsci.2016.03.014

Hényková E, Přikrylová Vránová H, Amakorová P, Pospíšil T, Žukauskaite A, Vlčková M, Urbánek L, Novák O, Mareš J, Kaňovský P, Strnad M (2016) Stable isotope dilution ultra-high performance liquid chromatography-tandem mass spectrometry quantitative profiling of tryptophan-related neuroactive substances in human serum and cerebrospinal fluid. J. Chromatogr. A 1437, 145-157; DOI: 10.1016/j.chroma.2016.02.009

Hassler S, Jung B, Lemke L, Novák O, Strnad M, Martinoia E, Neuhaus HE (2016) Function of the Golgi-located phosphate transporter PHT4;6 is critical for senescence associated processes in Arabidopsis. J. Exp. Bot. 67, 4671-4684; DOI:10.1093/jxb/erw249

Gruszka D, Gorniak M, Glodowska E, Wierus E, Oklešťková J, Janeczko A, Maluszynski M, Szarejko I (2016) A Reverse-Genetics Mutational Analysis of the Barley HvDWARF Gene Results in Identification of a Series of Alleles and Mutants with Short Stature of Various Degree and Disturbance in BR Biosynthesis Allowing a New Insight into the Process. Int. J. Mol. Sci. 17, 600; DOI: 10.3390/ijms17040600

Großkinsky DK, Tafner R, Moreno MV, Stenglein SA, García de Salamone IE, Nelson LM, Novák O, Strnad M, van der Graaff E, Roitsch T (2016) Cytokinin production by Pseudomonas fluorescens G20-18 determines biocontrol activity against Pseudomonas syringae in Arabidopsis. Sci. Rep. 6, 23310; DOI:10.1038/srep23310

Gouil Q, Novák O, Baulcombe DC (2016) SLTAB2 is the paramutated SULFUREA locus in tomato. J. Exp. Bot. 67, 2655-2664; DOI:10.1093/jxb/erw096

Floková K, Feussner K, Herrfurth C, Miersch O, Mik V, Tarkowská D, Strnad M, Feussner I, Wasternack C, Novak O (2016) A previously undescribed jasmonate compound in flowering Arabidopsis thaliana - The identification of cis-(+)-OPDA-Ile. Phytochemistry 122, 230-237; DOI: 10.1016/j.phytochem.2015.11.012

Eyer L, Vain T, Pařízková P, Oklestkova J, Barbez E, Kozubíková H, Pospíšil T, Wierzbicka R, Kleine-Vehn J, Fránek M, Strnad M, Robert S, Novák O (2016) 2,4-D and IAA amino acid conjugates show distinct metabolism in Arabidopsis. PLoS One 11, e0159269; DOI: 10.1371/journal.pone.0159269

Dziurka M, Janeczko A, Juhász C, Gullner G, Oklestková J, Novák O, Saja D, Skoczowski A, Tóbiás I, Barna B (2016) Local and systemic hormonal responses in pepper leaves during compatible and incompatible pepper-tobamovirus interactions. Plant Physiol. Bioch. 109, 355-364; DOI: 10.1016/j.plaphy.2016.10.013

Boccaccini A, Lorrai R, Ruta V, Frey A, Mercey-Boutet S, Marion-Poll A, Tarkowská D, Strnad M, Costantino P, Vittorioso P (2016) The DAG1 transcription factor negatively regulates the seed-to-seedling transition in Arabidopsis acting on ABA and GA levels. BMC Plant Biol. 16:198; DOI: 10.1186/s12870-016-0890-5

Bazgier V, Berka K, Otyepka M, Banáš P (2016) Exponential repulsion improves structural predictability of molecular docking. J. Comput. Chem. 37, 2485-2494; DOI: 10.1002/jcc.24473

Baltus CB, Jorda R, Marot C, Berka K, Bazgier V, Kryštof V, Prié G, Viaud-Massuar MC (2016) Synthesis, biological evaluation and molecular modeling of a novel series of 7-azaindole based tri-heterocyclic compounds as potent CDK2/Cyclin E inhibitors. Eur. J. Med. Chem. 108, 701-719; DOI: 10.1016/j.ejmech.2015.12.023

Asari S, Tarkowská D, Rolčík J, Novák O, Velázquez Palmero D, Bejai S, Meijer J (2016) Analysis of plant growth-promoting properties of Bacillus amyloliquefaciens UCMB5113 using Arabidopsis thaliana as host plant. Planta 19, 1-16; DOI:10.1007/s00425-016-2580-9

Arnold MD, Gruber C, Floková K, Miersch O, Strnad M, Novák O, Wasternack C, Hause B (2016) The Recently Identified Isoleucine Conjugate of cis-12-Oxo-Phytodienoic Acid Is Partially Active in cis-12-Oxo-Phytodienoic Acid-Specific Gene Expression of Arabidopsis thaliana. PLoS One 11: e0162829; DOI:10.1371/journal.pone.0162829

Aremu AO, Plačková L, Pěnčík A, Novák O, Doležal K, Van Staden J (2016) Auxin-cytokinin interaction and variations in their metabolic products in the regulation of organogenesis in two Eucomis species. New Biotechnol. 33, 883-890; DOI:10.1016/j.nbt.2016.09.001

Aremu AO, Plačková L, Novák O, Stirk WA, Doležal K, Van Staden J (2016) Cytokinin profiles in ex vitro acclimatized Eucomis autumnalis plants pre-treated with smoke-derived karrikinolide. Plant Cell Rep. 35, 227-238; DOI: 10.1007/s00299-015-1881-y

Allegri L, Baldan F, Mio C, Puppin C, Russo D, Kryštof V, Damante G (2016) Effects of BP-14, a novel cyclin-dependent kinase inhibitor, on anaplastic thyroid cancer cells. Oncol. Rep. 35, 2413-2418; DOI: 10.3892/or.2016.4614

Vacek J, Zatloukalova M, Geleticova J, Kubala M, Modriansky M, Fekete L, Masek J, Hubatka F, Turanek J (2016) Electrochemical platform for the detection of transmembrane proteins reconstituted into liposomes. Anal. Chem. 88, 4548-4556; DOI: 10.1021/acs.analchem.6b00618

Pyszková M, Biler M, Biedermann D, Valentová K, Kuzma M, Vrba J, Ulrichová J, Sokolová R, Mojović M, Popović-Bijelić A, Kubala M, Trouillas P, Křen V, Vacek J (2016) Flavonolignan 2,3-dehydroderivatives: Preparation, antiradical and cytoprotective activity. Free Rad. Biol. Med. 90, 114-125; DOI: 10.1016/j.freeradbiomed.2015.11.014

Pracharova J, Radosova Muchova T, Dvorak Tomastikova E, Intini F, Pacifico C, Natile G, Kasparkova J, Brabec V (2016) Anticancer potential of a photoactivated transplatin derivative containing methylazaindole ligands mediated by ROS generation and DNA cleavage. Dalton T. 45, 13179-13186; DOI: 10.1039/C6DT01467D

Nauš J, Šmecko S, Špundová M (2016) Chloroplast avoidance movement as a sensitive indicator of relative water content during leaf desiccation in the dark. Photosynthesis Res. 129, 217-225; DOI: 10.1007/s11120-016-0291-5

Kubala M, Cechova P, Geleticova J, Biler M, Stenclova T, Trouillas P, Biedermann D (2016) Flavonolignans as a novel class of sodium pump inhibitors. Front. Physiol. 7, 115; DOI: 10.3389/fphys.2016.00115

Brabec V, Pracharova J, Stepankova J, Sadler PJ, Kasparkova J (2016) Photo-induced DNA cleavage and cytotoxicity of a ruthenium(II) arene anticancer complex. J. Inorg. Biochem. 160, 149-155; DOI: 10.1016/j.jinorgbio.2015.12.029

Biler M, Trouillas P, Biedermann D, Křen V, Kubala M (2016) Tunable optical properties of silymarin flavonolignans. Journal of Photochemistry and Photobiology A: Chemistry 328, 154-162; DOI: 10.1016/j.jphotochem.2016.05.024

Beresova L, Vesela E, Chamrád I, Voller J, Yamada M, Furst T, Lenobel R, Chroma K, Gursky J, Krizova K, Mistrik M, Bartek J. (2016) Role of DNA repair factor XPC in response to replication stress, revealed by DNA fragile site affinity chromatography and quantitative proteomics. J. Proteome Res. 15, 4505-4517; DOI: 10.1021/acs.jproteome.6b00622

Hluska T, Dobrev PI, Tarkowská D, Frébortová J, Zalabák D, Kopečný D, Plíhal O, Kokáš F, Briozzo P, Zatloukal M, Motyka V, Galuszka P (2016) Cytokinin metabolism in maize: Novel evidence of cytokinin abundance, interconversions and formation of a new trans-zeatin metabolic product with a weak anticytokinin activity. Plant Sci. 247, 127-137; DOI: 10.1016/j.plantsci.2016.03.014

Groeme R, Airouche S, Kopečný D, Jaekel J, Savko M, Berjont N, Bussieres L, Le Mignon M, Jagic F, Zieglmayer P, Baron-Bodo V, Bordas-Le Floch V, Mascarell L, Briozzo P and Moingeon P (2016) Structural and Functional Characterization of the Major Allergen Amb a 11 from Short Ragweed Pollen. J. Biol. Chem. 291, 13076-13087; DOI: 10.1074/jbc.M115.702001

Kopečný D, Končitíková R, Popelka H, Briozzo P, Vigouroux A, Kopečná M, Zalabák D, Šebela M, Skopalová J, Frébort I, Moréra S (2016) Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site. FEBS J. 283 (2), 361-377; DOI:10.1111/febs.13581

Beinhauer J, Lenobel R, Loginov D, Chamrád I, Řehulka P, Sedlářová M, Marchetti-Deschmann M, Allmaier G, Šebela M (2016) Identification of Bremia lactucae and Oidium neolycopersici proteins extracted for intact spore MALDI mass spectrometric biotyping. Electrophoresis 37, 2940-2952; DOI:10.1002/elps.201600144

Beinhauer J, Raus M, Hanzalová A, Horčička P, Šebela M (2016) Intact spore MALDI-TOF mass spectrometry and proteomic analysis of Puccinia pathogenic fungi. Biochim. Biophys. Acta - Proteins & Proteomics 1864, 1093-1103; DOI: 10.1016/j.bbapap.2016.06.002

Šebela M (2016) Solid mixed matrices and their advantages in matrixassisted laser desorption/ionisation time-of-flight mass spectrometry. Spectroscopy Europe 28, 10-14

Šebela M (2016) Analysis and sequencing of nucleic acids by matrix-assisted laser desorption/ionisation mass spectrometry. Spectroscopy Europe 28, 11-15

Takáč T, Vadovič P, Pechan T, Luptovčiak I, Šamajová O, Šamaj J (2016) Comparative proteomic study of Arabidopsis mutants mpk4 and mpk6. Sci Rep 6, 28306; DOI: 10.1038/srep28306

Takáč T, Obert B, Rolčík J, Šamaj J (2016) Improvement of adventitious root formation in flax using hydrogen peroxide. New Biotech. 33, 728-734; DOI: 10.1016/j.nbt.2016.02.008

Bajgar V, Penhaker M, Martinková L, Pavlovič A, Bober P, Trchová M, Stejskal J (2016) Cotton Fabric Coated with Conducting Polymers and its Application in Monitoring of Carnivorous Plants. Sensors 16, 498; DOI: 10.3390/s16040498

Vylíčilová H, Husičková A, Spíchal L, Srovnal J, Doležal K, Plíhal O, Plíhalová L (2016) C2-substituted aromatic cytokinin sugar conjugates delay the onset of senescence by maintaining the activity of the photosynthetic apparatus. Phytochemistry 122, 22-33; DOI: 10.1016/j.phytochem.2015.12.001.

Zalabák D, Johnová P, Plíhal O, Šenková K, Šamajová O, Jiskrová E, Novák O, Jackson D, Mohanty A, Galuszka P (2016) Maize cytokinin dehydrogenase isozymes are predominantly localized to the vacuole. Plant Physiol. Biochem. 104, 114-124; DOI: 10.1016/j.plaphy.2016.03.013

Kuczynska K, Cmoch P, Rárová L, Oklešťková J, Korda A, Pakulski Z, Strnad M (2016) Influence of intramolecular hydrogen bonds on regioselectivity of glycosylation. Synthesis of lupane-type saponins bearing the OSW-1 saponin disaccharide unit and its isomers. Carbohydr Res. 423, 49-69; DOI: 10.1016/j.carres.2016.01.010.

Rárová L, Steigerová J, Kvasnica M, Bartůněk P, Křížová K, Chodounská H, Kolář Z, Sedlák D, Oklešťková J, Strnad M (2016) Structure activity relationship studies on cytotoxicity and the effects on steroid receptor of AB-functionalized cholestanes. J Steroid Biochem. Mol. Biol. 159, 154-169; DOI: 10.1016/j.jsbmb.2016.03.017

Pavlovič A, Stolárik T, Nosek L, Kouřil R, Ilík P (2016) Light-induced gradual activation of photosystem II in dark-grown Norway spruce seedlings. Biochim. Biophys. Acta-Bioenerg. 1857, 799-809; DOI:10.1016/j.bbabio.2016.02.009

Pavlovič A, Krausko M, Adamec L (2016) A carnivorous sundew plant prefers protein over chitin as a source of nitrogen from its traps. Plant Physiol. Biochem. 104, 11-16; DOI: 10.1016/j.plaphy.2016.03.008

Kouřil R, Nosek L, Bartoš J, Boekema EJ, Ilík P (2016) Evolutionary loss of light-harvesting proteins Lhcb6 and Lhcb3 in major land plant groups - break-up of current dogma. New Phytologist 210, 808-814; DOI: 10.1111/nph.13947

Datta KJ, Gawande MB, Datta KKR, Ranc V, Pechousek J, Krizek M, Tucek J, Kale R, Pospisil P, Varma RS, Asefa T, Zoppellaro G, Zboril R (2016) Micro-mesoporous iron oxides with record efficiency for the decomposition of hydrogen peroxide: morphology driven catalysis for the degradation of organic ontaminants. J. Mater. Chem. A 4, 596-604; DOI: 10.1039/C5TA08386A

von Wangenheim D, Rosero A, Komis G, Šamajová O, Ovečka M, Voigt B, Šamaj J (2016) Endosomal Interactions during Root Hair Growth. Front. Plant Sci. 6, 1262; DOI: 10.3389/fpls.2015.01262

Novák D, Kuchařová A, Ovečka M, Komis G, Šamaj J (2016) Developmental Nuclear Localization and Quantification of GFP-Tagged EB1c in Arabidopsis Root Using Light-Sheet Microscopy. Front. Plant Sci. 6, 1185; DOI:10.3389/fpls.2015.01187

Prasad A, Ferretti U, Sedlářová M, Pospíšil P (2016) Singlet oxygen production in Chlamydomonas reinhardtii under heat stress. Sci Rep 6, 20094; DOI: 10.1038/srep20094

Baránková B, Lazár D, Nauš J (2016) Analysis of the effect of chloroplast arrangement on optical properties of green tobacco leaves. Remote Sens. Environ. 174, 181-196; DOI: 10.1016/j.rse.2015.12.011

Frömmel J, Tarkowski P, Kopečný D, Šebela M (2016) The use of tomato aminoaldehyde dehydrogenase 1 for the detection of aldehydes in fruit distillates. New Biotechnol. 33, 666-675; DOI: 10.1016/j.nbt.2015.11.010

Loginov D, Šebela M (2016) Proteomics of survival structures of fungal pathogens. New Biotechnol. 33, 655-665; DOI:10.1016/j.nbt.2015.12.011

Cubizolles N, Rey E, Choulet F, Rimbert H, Laugier C, Balfourier F, Bordes J, Poncet C, Jack P, James C, Gielen J, Argillier O, Jaubertie JP, Auzanneau J, Rohde A, Ouwerkerk PBF, Korzun V, Kollers S, Guerreiro L, Hourcade D, Robert O, Devaux P, Mastrangelo AM, Feuillet C, Sourdille P, Paux E (2016) Exploiting the Repetitive Fraction of the Wheat Genome for High-Throughput Single-Nucleotide Polymorphism Discovery and Genotyping. Plant Genome-US 9; DOI: 10.3835/plantgenome2015.09.0078

Petrovská B, Šebela M, Doležel J (2016) Discovering the world of plant nuclear proteins. In: Rose RJ (ed.) Molecular Cell Biology of the Growth and Differentiation of Plant Cells. CRC Press, 22-36; ISBN 9781498726023; DOI: 10.1201/b20316-4

2015

Dyčka F, Franc V, Fryčák P, Raus M, Řehulka M, Lenobel R, Allmaier G, Marchetti-Deschmann M, Šebela M (2015) Evaluation of pseudotrypsin cleavage specificity towards proteins by MALDI-TOF mass spectrometry. PProtein Pept. Lett. 22, 1123-1132; DOI: 10.2174/0929866522666151008151617

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Macas J, Novák P, Pellicer J, Čížková J, Koblížková A, Neumann P, Fuková I, Doležel J, Kelly LJ, Leitch IJ (2015) In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae. PLoS One 10, e0143424; DOI: 10.1371/journal.pone.0143424

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Garbus I, Romero JR, Valárik M, Vanžurová H, Karafiátová M, Cáccamo M, Doležel J, Tranquilli G, Helguera M, Echenique V (2015) Characterization of repetitive DNA landscape in wheat homeologous group 4 chromosomes. BMC Genomics 16, 375; DOI: 10.1186/s12864-015-1579-0

Burešová V, Kopecký D, Bartoš J, Martinek P, Watanabe N, Vyhnánek T, Doležel J (2015) Variation in genome composition of blue-aleurone wheat. Theor. Appl. Genet. 128, 273-282; DOI: 10.1007/s00122-014-2427-3

Ma J, Stiller J, Zheng Z, Wei Y, Zheng Y-L, Yan G, Doležel J, Liu C (2015) Putative interchromosomal rearrangements in the hexaploid wheat (Triticum aestivum L.) genotype 'Chinese Spring' revealed by gene locations on homoeologous chromosomes. BMC Evol. Biol. 15, 37; DOI: 10.1186/s12862-015-0313-5

Dierking R, Azhaguvel P, Kallenbach R, Saha M, Bouton J, Chekhovskiy K, Kopecký D, Hopkins A (2015) Linkage maps of a Mediterranean x Continental tall fescue population and their comparative analysis with other Poaceae species. Plant Genome 8, 1-18; DOI: 10.3835/plantgenome2014.07.0032

Helguera M, Rivarola M, Clavijo B, Martis MM, Vanzetti LS, González S, Garbus I, Leroy P, Šimková H, Valárik M, Caccamo M, Doležel J, Mayer KFX, Feuillet C, Tranquilli G, Paniego N, Echenique V (2015) New insights into the wheat chromosome 4D structure and virtual gene order, revealed by survey pyrosequencing. Plant Sci. 233, 200-212; DOI: 10.1016/j.plantsci.2014.12.004

Ochoa V, Madrid E, Said M, Rubiales D, Cabrera A (2015) Molecular and cytogenetic characterization of a common wheat-Agropyron cristatum chromosome translocation conferring resistance to leaf rust. Euphytica 201, 89-95; DOI: 10.1007/s10681-014-1190-5

Barghini E, Natali L, Giordani T, Cossu RM, Scalabrin S, Cattonaro F, Šimková H, Vrána J, Doležel J, Morgante M, Cavallini A (2015) LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome. DNA Res. 22, 91-100; DOI: 10.1093/dnares/dsu042

Mojzych M, Sebela M (2015) Synthesis and biological activity evaluation of Schiff bases of 5-acyl-1,2,4-triazine. J. Chem. Soc. Pak. 37, 300-305; DOI: - - -

Lenobel R, Řehulková H, Šebela M, Franc V, Kahle V, Moravcová D, Řehulka P (2015) Analysis of peptide mixtures for proteomics research using LC-ESI-MS with a simple microgradient device. LC GC N. Am. 33, 420; DOI: - - -

Aremu AO, Stirl WA, Kulkarni MG, Tarkowská D, Turečková V, Gruz J Šubrtová M, Pěnčík A, Novák O, Doležal K, Strnad M, Van Staden J (2015) Evidence of phytohormones and phenolic acids variability in garden-waste-derived vermicompost leachate, a well-known plant growth stimulant. Plant Growth Regul. 75, 483-492; DOI: 10.1007/s10725-014-0011-0

Zhang T-Q, Lian H, Tang H, Doležal K, Zhou C-M, Yu S, Chen J-H, Chen Q, Liu H, Ljung K, Wang J-W (2015) An Intrinsic MicroRNA Timer Regulates Progressive Decline in Shoot Regenerative Capacity in Plants. Plant Cell 27, 349-60; DOI: 10.1105/tpc.114.135186

Amoo SO, Aremu AO, Moyo M, Sunmonu TO, Plíhalová L, Doležal K, Van Staden J (2015) Physiological and biochemical effects of a tetrahydropyranyl-substituted meta-topolin in micropropagated Merwilla plumbea. Plant Cell Tissue Organ Cult. 121, 579-590; DOI: 10.1007/s11240-015-0728-0

Aremu AO, Masondo NA, Rengasamy KRR, Amoo SO, Gruz J, Bíba O, Šubrtová, M, Pěnčík A, Novák O, Doležal K, Van Staden J (2015) Physiological role of phenolic biostimulants isolated from brown seaweed Ecklonia maxima on plant growth and development. Planta 241, 1313-1324; DOI: 10.1007/s00425-015-2256-x

Bahaji A, Sánchez-López AM, De Diego N, Muñoz FJ, Baroja-Fernández E, Li J, Ricarte-Bermejo A, Baslam, Aranjuelo I, Almagro G, Humplík JF, Novák O, Spíchal L, Doležal K, Pozueta-Romero J (2015) Plastidic Phosphoglucose Isomerase Is an Important Determinant of Starch Accumulation in Mesophyll Cells, Growth, Photosynthetic Capacity, and Biosynthesis of Plastidic Cytokinins in Arabidopsis. PLoS One 10 (4): e0126531; DOI: 10.1371/journal.pone.0119641

Plačková L, Hrdlička J, Smýkalová I, Cvečková M, Novák O, Griga, M., Doležal K (2015) Cytokinin profiling of long-term in vitro pea (Pisum sativum L.) shoot cultures. Plant Growth Regul., 125-132; DOI: 10.1007/s10725-015-0044-z

Antoniadi I, Plačková L, Simonovik B, Doležal K, Turnbull C, Ljung K, Novák O (2015) Cell-type-specific cytokinin distribution within the arabidopsis primary root apex. Plant Cell 27, 1955-1967; DOI: 10.1105/tpc.15.00176

Aremu AO, Plačková L, Gruz J, Bíba O, Šubrtová M, Novák O, Doležal K, Van Staden J (2015) Accumulation pattern of endogenous cytokinins and phenolics in different organs of 1-year-old cytokinin pre-incubated plants: Implications for conservation. Plant Biology, 1146-1155; DOI: 10.1111/plb.12367

Branná P, Rouchal M, Prucková Z, Dastychová L, Lenobel R, Pospíšil T, Maláč K, Vícha R (2015) Rotaxanes Capped with host molecules: supramolecular behavior of adamantylated bisimidazolium salts containing a biphenyl centerpiece. Chem.-Eur. J. 21, 11712-11718; DOI: 10.1002/chem.201501353

Končitíková R, Vigouroux A, Kopečná M, Andree T, Bartoš J, Šebela M, Moréra S, Kopečný D (2015) Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7. Biochem. J. 468, 109-123; DOI: 10.1042/BJ20150009

Krupka M, Zachova K, Cahlikova R, Vrbkova J, Novak Z, Sebela M, Weigl E, Raska M (2015) Endotoxin-minimized HIV-1 p24 fused to murine hsp70 activates dendritic cells, facilitates endocytosis and p24-specific Th1 response in mice. Immunol. Lett., 166, 36-44; DOI: 10.1016/j.imlet.2015.05.010

Salkić A, Ćavar Zeljković S (2015) Preliminary Investigation of Bioactivity of Green Tea (Camellia sinensis), Rooibos (Asphalatus linearis), and Yerba Mate (Ilex paraguariensis). Journal of Herbs, Spices and Medicinal Plants 21, 259-266; DOI: 10.1080/10496475.2014.955898

Sebastian J, Ryu KH, Zhou J, Tarkowská D, Tarkowski P, Cho YH, Yoo SD, Kim ES, Lee JY (2015) PHABULOSA Controls the Quiescent Center-Independent Root Meristem Activities in Arabidopsis thaliana. PLoS Genet. 11, e1004973; DOI: 10.1371/journal.pgen.1004973

Semić I, Ćavar Zeljković S (2015) The Influence of some 4-Methylcoumarins on the Electrodeposition and Characteristics of Zinc Coating. Prot. Met. Phys. Chem. Surf. 51, 131-137; DOI: 10.1134/S2070205115010141

Ćavar Zeljković S, Maksimović M (2015) Chemical composition and bioactivity of essential oil from Thymus species in Balkan Peninsula. Phytochem. Rev. 14, 335-352; DOI: 10.1007/s11101-014-9378-9

Ćavar S, Zwanenburg B, Tarkowski P (2015) Strigolactones: occurrence, structure, and biological activity in the rhizosphere. Phytochem. Rev. 14, 691-711; DOI: 10.1007/s11101-014-9370-4

Komis G, Mistrik M, Šamajová O, Ovečka M, Bartek J & Šamaj J (2015), Superresolution live imaging of plant cells using structured illumination microscopy. Nat. Protoc. 10, 1248-1263; DOI: 10.1038/nprot.2015.083

Ovečka M, Vaškebová L, Komis G, Luptovčiak I, Smertenko A & Šamaj J (2015), Preparation of plants for developmental and cellular imaging by light-sheet microscopy. Nat. Protoc. 10, 1234-1247; DOI: 10.1038/nprot.2015.081

Šamec D, Durgo K, Grúz J, Kremer D, Kosalec I, Piljac-Žegarac J, Salopek-Sondi B (2015) Genetic and phytochemical variability of six Teucrium arduini L. populations and their antioxidant/prooxidant behaviour examined by biochemical, macromolecule- and cell-based approaches. Food Chem. 186, 298-305; DOI: 10.1016/j.foodchem.2014.07.135

Aremu AO, Stirk WA, Masondo NA, Plačková L, Novák O, Pěnčík A, Zatloukal M, Nisler J, Spíchal L, Doležal K, Finnie JF, Van Staden J (2015) Dissecting the role of two cytokinin analogues (INCYDE and PI-55) on in vitro organogenesis, phytohormone accumulation, phytochemical content and antioxidant activity. Plant Sci. 238, 81-94; DOI:10.1016/j.plantsci.2015.05.018

Aremu AO, Plačková L, Gruz J, Bíba O, Novák O, Stirk WA, Doležal K, Van Staden J. (2015) Seaweed-Derived Biostimulant (Kelpak®) Influences Endogenous Cytokinins and Bioactive Compounds in Hydroponically Grown Eucomis autumnalis. J. Plant Growth Regul.,1-12; DOI: 10.1007/s00344-015-9515-8

Petrovská B, Šebela M, Doležel J (2015) Inside a plant nucleus: discovering the proteins. J. Exp. Bot. 66, 1627-1640; DOI: 10.1093/jxb/erv041

Saichana N, Tanizawa K, Pechoušek J, Novák P, Yakushi T, Toyama H, Frébortová J (2015) PqqE from Methylobacterium extorquens AM1: a radical S-adenosyl-L-methionine enzyme with an unusual tolerance to oxygen. J. Biochem., 1-13; DOI: 10.1093/jb/mvv073

Šamec D, Gruz J, Durgo K, Kremer D, Kosalec I, Valek Žulj L, Martinez S, Salopek-Sondi B, Piljac-Žegarac J (2015) Molecular and cellular approach in the study of antioxidant/pro-oxidant properties of Micromeria croatica (Pers.) Schott. Nat. Prod. Res. 29, 1770-1774; DOI: 10.1080/14786419.2014.999334

Hinsch J, Vrabka J, Oeser B, Novák O, Galuszka P, Tudzynski P (2015) De novo biosynthesis of cytokinins in the biotrophic fungus Claviceps purpurea. Environ. Microbiol., 2935-2951; DOI:10.1111/1462-2920.12838

Karády M, Novák O, Horna A, Strnad M, Doležal K (2015) High Performance Liquid Chromatography/Electrochemistry/High Resolution Electrospray Ionization-Mass Spectrometry (HPLC/EC/HR ESI-MS) Characterization of Selected Cytokinins Oxidation Product. Electroanalysis 27, 406-414; DOI: 10.1002/elan.201400286

Dzurová L, Forneris F, Savino S, Galuszka P, Vrabka J, Frébort I (2015) The three-dimensional structure of "Lonely Guy" from Claviceps purpurea provides insights into the phosphoribohydolase function of Rossmann fold-containing lysine decarboxylase-like proteins. Proteins 83, 1539-1546; DOI: 10.1002/prot.24835

Stolárik T, Henselová M, Martinka M, Novák O, Zahoranová A, Černák M (2015) Effect of Low-Temperature Plasma on the Structure of Seeds, Growth and Metabolism of Endogenous Phytohormones in Pea (Pisum sativum L.). Plasma Chem. Plasma Process. 4, 659-676; DOI: 10.1007/s11090-015-9627-8

Vaculík M, Pavlovič A, Lux A (2015) Silicon alleviates cadmium toxicity by enhanced photosynthetic rate and modified bundle sheath´s cell chloroplasts ultrastructure in maize. Ecotoxicology and Enviromental Safety 120, 66 - 73; DOI: 10.1016/j.ecoenv.2015.05.026

Pavlovič A, Saganová M (2015) A novel insight into the cost-benefit model for the evolution of botanical carnivory. Ann. Bot. 115, 1075 - 1092; DOI: 10.1093/aob/mcv050

Bekešová S, Komis G, Křenek P, Vyplelová P, Ovečka M, Luptovčiak I, Illés P, Kuchařová A, Šamaj J(2015) Monitoring protein phosphorylation by acrylamide pendant Phos-Tag™ in various plants. Front. Plant Sci. 6, 336; DOI: 10.3389/fpls.2015.00336

Yan Y, Takáč T, Li X, Chen H, Wang Y, Xu E, Xie L, Su Z, Šamaj J, Xu C (2015) Variable content and distribution of arabinogalactan proteins in banana (Musa spp.) under low temperature stress. Front. Plant Sci. 6, 353; DOI: 10.3389/fpls.2015.00353

Ncube B, Nair JJ, Rárová L, Strnad M, Finnie JF, Van Staden J (2015) Seasonal pharmacological properties and alkaloid content in Cyrtanthus contractus N.E. Br. S. Afr. J. Bot. 97, 69-76; DOI: 10.1016/j.sajb.2014.12.005

Nair JJ, Rárová L, Strnad M, Bastida J, van Staden J (2015) Mechanistic Insights to the Cytotoxicity of Amaryllidaceae Alkaloids. Nat. Prod. Commun. 10, 171-182

Sidoryk K, Korda A, Rárová L, Oklešťková J, Strnad M, Cmoch P, Pakulski Z, Gwardiak K, Karczewski R, Luboradzki R (2015) Synthesis and biological activity of new homolupanes and homolupane saponins. Tetrahedron 71, 2004-2012; DOI: 10.1016/j.tet.2015.02.008

Humplík JF, Lazár D, Husičková A, Spíchal L (2015) Automated phenotyping of plant shoots using imaging methods for analysis of plant stress responses - a review. Plant Methods 11, 29; DOI:10.1186/s13007-015-0072-8

Humplík JF, Lazár D, Fürst T, Husičková A, Hýbl M, Spíchal L (2015) Automated integrative high-throughput phenotyping of plant shoots: a case study of the cold-tolerance of pea (Pisum sativum L.). Plant Methods 11, 20; DOI: 10.1186/s13007-015-0063-9

Holásková E, Galuszka P, Frébort I, Tufan Öz M (2015) Antimicrobial peptide production and plant-based expression systems for medical and agricultural biotechnology. Biotechnol Adv.,1005-1023; DOI: 10.1016/j.biotechadv.2015.03.007

Nakai T, Ito H, Kobayashi K, Takahashi Y, Hori H, Tsubaki M, Tanizawa K, Okajima T (2015) The Radical S-Adenosyl-L-methionine Enzyme QhpD Catalyzes Sequential Formation of Intra-protein Sulfur-to-Methylene Carbon Thioether Bonds. J. Biol. Chem, 1-47; DOI: 10.1074/jbc.M115.638320

Rác M, Sedlářová M, Pospíšil P (2015) The formation of electronically excited species in the human multiple myeloma cell suspension.Sci Rep. 5, 8882; DOI: 10.1038/srep08882

Rác M, Křupka M, Binder S, Sedlářová M, Matušková Z, Raška M, Pospíšil P (2015) Oxidative damage of U937 human leukemic cells caused by hydroxyl radical results in singlet oxygen formation. PLoS ONE 10(3), e0116958; DOI: 10.1371/journal.pone.0116958

Takáč T, Šamaj J (2015) Advantages and limitations of shot-gun proteomic analyses on Arabidopsis plants with altered MAPK signaling. Front. Plant Sci. 6; DOI: 10.3389/fpls.2015.00107

Humplík JF, Bergougnoux V, Jandová M, Šimura J, Pěnčík A, Tomanec O, Rolčík J, Novák O, Fellner M (2015) Endogenous Abscisic Acid Promotes Hypocotyl Growth and Affects Endoreduplication during Dark-Induced Growth in Tomato (Solanum lycopersicum L.). PLoS ONE 10, e0117793; DOI: 10.1371/journal.pone.0117793

Beinhauer J, Liangqiao B, Fan H, Šebela M, Kukula M, Barrera JA, Schug KA (2015) Bulk derivatization and cation exchange restricted access media-based trap-and-elute liquid chromatography-mass spectrometry method for determination of trace estrogen in serum. Anal. Chim. Acta, 74-81; DOI: 10.1016/j.aca.2014.11.032.

Kuderová A, Gallová L, Kuricová K, Nejedlá E, Čurdová A, Micenková L, Plíhal O, Šmajs D, Spíchal L, Hejátko J (2015) Identification of AHK2- and AHK3-like cytokinin receptors in Brassica napus reveals two subfamilies of AHK2 orthologues. J. Exp. Bot. 66, 339-353; DOI:10.1093/jxb/eru422

Brabec V, Prachařová J, Nováková O, Gibson D, Kašpárková J (2015) The induction of lysis in lysogenic strains of Escherichia coli by a new antitumor transplatin derivative and its DNA interactions. Dalton Trans., Advance Article, 3573-3582; DOI: 10.1039/C4DT02603A

Lazár D (2015) Parameters of photosynthetic energy partitioning. J. Plant Physiol. 175, 131-147, DOI: 10.1016/j.jplph.2014.10.021

Maixnerová L, Horvitz A, Kuncová G, Přibyl M, Šebela M, Koštejn M (2015) Enzymatic sensor of putrescine with optical oxygen transducer - mathematical model of responses of sensitive layer. Chem. Pap. 69, 158-166; DOI: 10.1515/chempap-2015-0041

Frömmel J, Šebela M, Demo G, Lenobel R, Pospíšil T, Soural M, Kopečný D (2015) N-acyl-ω-aminoaldehydes are efficient substrates of plant aminoaldehyde dehydrogenase isoenzymes from Pisum sativum. Amino Acids 47, 175-187; DOI: 10.1007/s00726-014-1853-5

Helmel M, Marchetti-Deschmann M, Raus M, Posch A, Herwig C, Šebela M, Allmaier G (2015) Intact cell mass spectrometry as a progress tracking tool for batch and fed-batch fermentation processes. Anal. Biochem. 470, 25-33; DOI: 10.1016/j.ab.2014.10.008

Grúz J, Pospíšil J, Kozubíková H, Pospíšil T, Doležal K, Bunzel M, Strnad M (2015) Determination of free diferulic, disinapic and dicoumaric acids in plants and foods. Food Chem. 171, 280-286; DOI: 10.1016/j.foodchem.2014.08.131

2014

Koprna R, Spíchal L, Nisler J, Gucký T, Dundálková L, Spáčilová V (2014) Budoucnost využití fytohormonálních derivátů v zemědělství pro moření osiva a foliární aplikaci u jarního ječmene. Aktuální poznatky v pěstování, šlechtění, ochraně rostlin a zpracování produktů, Úroda 12, 85-92; ISSN 0139-6013

Hájková M, Koprna R, Černý L (2014) Výsledky maloparcelkových pokusů s aplikací přípravků řady Galleko firmy Trisol v jarním ječmeni. Konference Technologie sladovnického ječmene - Ječmen na rozcestí 27. - 30. 1. 2014, Sdružení pro ječmen a slad (SJS),54-55; ISBN 978-80-213-2441-1

Škarpa P, Richter R, Vlk R, Koprna R, Spíchal L (2014) Vliv mimokořenové aplikace derivátu 6-benzylaminopurinu na výnos máku setého. Prosperující olejniny, Sborník z konference s mezinárodní účastí. 11. - 12. 12. 2014, ČZU Praha, ISBN 978-80-213-2517-3

Endo TR, Kubaláková M, Vrána J, Doležel J (2014) Hyperexpansion of wheat chromosomes sorted by flow cytometry. Genes Genet. Syst. 89, 181-185; DOI: 10.1266/ggs.89.181

Lucas SJ, Akpınar BA, Šimková H, Kubaláková M, Doležel J, Budak H (2014) Next generation sequencing of flow-sorted wheat chromosome 5D reveals lineage-specific translocations and widespread gene duplications. BMC Genomics 15, 1080; DOI: 10.1186/1471-2164-15-1080

Mago R, Tabe L, Vautrin S, Šimková H, Kubaláková M, Upadhyaya N, Berges H, Kong X, Breen J, Doležel J, Appels R, Ellis JG, Spielmeyer W (2014) Major haplotype divergence including multiple germin-like protein genes, at the wheat Sr2 adult plant stem rust resistance locus. BMC Plant Biol. 14, 379; DOI: 10.1186/s12870-014-0379-z

Cápal P, Ondřej V (2014) Expression and epigenetic profile of protoplast cultures (Cucumis sativus L.). In Vitro Cell. Dev. Biol.-Plant 50, 789-794; DOI: 10.1007/s11627-014-9638-9

Michalcová V, Dušinský R, Sabo M, Al Beyroutiová M, Hauptvogel P, Ivaničová Z, Švec M (2014) Taxonomical classification and origin of Kamut^® wheat. Plant Syst. Evol. 300, 1749-1757; DOI: 10.1007/s00606-014-1001-4

Ouyang S, Zhang D, Han J, Zhao X, Cui Y, Song W, Huo N, Liang Y, Xie J, Wang Z, Wu Q., Chen Y-X, Lu P, Zhang D-Y, Wang L, Sun H, Yang T, Keeble-Gagnere G, Appels R, Doležel J, Ling H-Q, Luo M, Gu Y, Sun Q, Liu Z (2014) Fine physical and genetic mapping of powdery mildew resistance gene MlIW172originating from wild emmer (Triticum dicoccoides). PLoS ONE 9, e100160; DOI: 10.1371/journal.pone.0100160

Pfeifer M, Kugler KG, Sandve SR, Zhan B, Rudi H, Hvidsten TR, Rogers J, Doležel J, Pozniak C, Eversole K, Feuillet C, Gill B, Friebe B, Lukaszewski AJ, Sourdille P, Endo TR, Kubaláková M, Číhalíková J, Dubská Z, Vrána J, Šperková R, Šimková H, Febrer M, Clissold L, McLay K, Singh K, Chhuneja P, Singh NK, Khurana J, Akhunov E, Choulet F, Alberti A, Barbe V, Wincker P, Kanamori H, Kobayashi F, Itoh T, Matsumoto T, Sakai H, Tanaka T, Wu J, Ogihara Y, Handa H, Maclachlan PR, Sharpe A, Klassen D, Edwards D, Batley J, Olsen OA, Sandve SR, Lien S, Steuernagel B, Wulff B, Caccamo M, Ayling S, Ramirez-Gonzalez RH, Clavijo BJ, Wright J, Pfeifer M, Spannagl M, Martis MM, Mascher M, Chapman J, Poland JA, Scholz U, Barry K, Waugh R, Rokhsar DS, Muehlbauer GJ, Stein N, Gundlach H, Zytnicki M, Jamilloux V, Quesneville H, Wicker T, Faccioli P., Colaiacovo M, Stanca AM, Budak H, Cattivelli L, Glover N, Pingault L, Paux E, Sharma S, Appels R, Bellgard M, Chapman B, Nussbaumer T, Bader KC, Rimbert H, Wang S, Knox R, Kilian A, Alaux M, Alfam F, Couderc L, Guilhot N, Viseux C, Loaec, M, Keller B, Praud S, Mayer KF (2014) Genome interplay in the grain transcriptome of hexaploid bread wheat. Science 345: 1250091; DOI: 10.1126/science.1250091

Marcussen T, Sandve SR, Heier L, Spannagl M, Pfeifer M, Rogers J, Doležel J, Pozniak C, Eversole K, Feuillet C, Gill B, Friebe B, Lukaszewski AJ, Sourdille P, Endo TR, Kubaláková M, Číhalíková J, Dubská Z, Vrána J, Šperková R, Šimková H, Febrer M, Clissold L, McLay K, Singh K, Chhuneja P, Singh NK, Khurana J, Akhunov E, Choulet F, Alberti A, Barbe V, Wincker P, Kanamori H, Kobayashi F, Itoh T, Matsumoto T, Sakai H, Tanaka T, Wu J, Ogihara Y, Handa H, Maclachlan PR, Sharpe A, Klassen D, Edwards D, Batley J, Olsen OA, Sandve SR, Lien S, Steuernagel B, Wulff B, Caccamo M, Ayling S, Ramirez-Gonzalez RH, Clavijo BJ, Wright J, Pfeifer M, Spannagl M, Martis MM, Mascher M, Chapman J, Poland JA, Scholz U, Barry K, Waugh R, Rokhsar DS, Muehlbauer GJ, Stein N, Gundlach H, Zytnicki M, Jamilloux V, Quesneville H, Wicker T, Faccioli P, Colaiacovo M, Stanca AM, Budak H, Cattivelli L, Glover N, Pingault L, Paux E, Sharma S, Appels R, Bellgard M, Chapman B, Nussbaumer T, Bader KC, Rimbert H, Wang S, Knox R, Kilian A, Alaux M, Alfam F, Couderc L, Guilhot N, Viseux C, Loaec M, Keller B, Praud S, Jakobsen KS, Wulff BB, Steuernagel B, Mayer KF (2014) Ancient hybridizations among the ancestral genomes of bread wheat. Science 345: 1250092; DOI: 10.1126/science.1250092

Ćavar S, Šolić M E, Maksimović M (2014) Chemical Composition and Antioxidant Activity of Two Satureja Species from Mt. Biokovo. Botanica Serbica 38, 159-165; ISSN: 1821-2158

Hatipi M, Papajani V, Ćavar S, Koliqi R (2014) Analysis of Volatile Compounds of Origanum vulgare L. Growing Wild in Kosovo. J. Essent. Oil Bear. Pl. 17, 148-157;
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Toska Papajani V, Hatipi M, Ćavar S, Haloci E (2014) GC/MS Analysis of the Essential Oil of Thymus tosevii Vel. from Kosovo. International Journal of Pharmacognosy and Phytochemistry 29, 1276-1282; ISSN: 2051-7858

Doležalová I, Koprna R, Petrželová I, Duchoslav M (2014) Možné způsoby chemické ochrany rokety seté - předběžná studie. Úroda 62, 517-520

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Křenek P, Smékalová V (2014) Quantification of stress-induced mitogen-activated protein kinase expressional dynamic using reverse transcription quantitative real-time PCR. Methods in Molecular Biology 1171, 13-25; DOI: 10.1007/978-1-4939-0922-3_2

Cmoch P, Korda A, Rárová L, Oklešťková J, Strnad M, Gwardiak K, Karczewski R, Pakulski Z (2014) Synthesis of lupane-type saponins containing unusual α-D-idopyranoside fragment as potent cytotoxic agents. Eur. J. Org. Chem., 2717 - 2730; DOI: 10.1002/ejoc.201402187

Kvasnica M, Oklešťková J, Bazgier V, Rárová L, Berka K, Strnad M (2014) Biological activities of new monohydroxylated brassinosteroid analogues with a carboxylic group in the side chain. Steroids 85, 58 - 64; DOI: 10.1016/j.steroids.2014.04.007

Nair JJ, Rárová L, Strnad M, Bastidad J, Cheesman L, van Staden J (2014) Crinane Alkaloids of the Amaryllidaceae with Cytotoxic Effects in Human Cervical Adenocarcinoma (HeLa) Cells. Nat. Prod. Commun. 9, 461 - 466; DOI: will be provided later

Ovečka M, Takáč T, Komis G, Vadovič P, Bekešová S, Doskočilová A, Smékalová V, Luptovčiak I, Šamajová O , Schweighofer A, Meskiene I, Jonak C, Křenek P,Lichtscheidl I, Skultety L, Hirt H, Šamaj J (2014) Salt-induced subcellular kinase relocation and seeding susceptibility caused by overexpression of Medicago SIMKK in Arabidopsis. J. Exp. Bot. 65, 2335 - 2350; DOI: 10.1093/jxb/eru115

Komis G, Mistrík M, Šamajová O, Doskočilová A, Ovečka M, Illés P, Bártek J, Šamaj J (2014) Dynamics and organization of cortical microtubules as revealed by superresolution structured illumination microscopy. Plant Physiology, 129 - 148; DOI: 10.1104/pp.114.238477

Zalabák D, Galuszka P, Mrízová K, Podlešáková K, Gu R, Frébortová J (2014) Biochemical characterization of the maize cytokinin dehydrogenase family and cytokinin profiling in developing maize plantlets in relation to the expression of cytokinin dehydrogenase genes. Plant Physiol. Biochem. 74, 283-293; DOI:10.1016/j.plaphy.2013.11.020

Pavlovič A, Krausko M, Libiaková M, Adamec L (2014) Feeding on prey increases photosynthetic efficiency in the carnivorous sundew Drosera capensis. Ann. of Bot. 113, 69-78; DOI: 10.1093/aob/mct254

Cmoch P, Korda A, Rárová L, Oklešťková J, Strnad M, Luboradzki R, Paluski Z (2014) Synthesis and structure-reactivity relationship study of cytotoxic lupane-type 3b-O-monodesmosidic saponins with an extended C-28 side chain. Tetrahedron 70, 2717-2730; DOI: 10.1016/j.tet.2014.03.006

Tian F, Greplová M, Frébort I, Dale N, Napier R (2014) A highly selective biosensor with nanomolar sensitivity based on cytokinin dehydrogenase. PLoS ONE 9, e90877; DOI: 10.1371/journal.pone.0090877

Nakai T, Deguchi T, Frébort I, Tanizawa K, Okajima T (2014) Identification of genes essential for the biogenesis of quinohemoprotein amine dehydrogenase. Biochemistry, 53, 895 - 907; DOI: 10.1021/bi401625m

Zhang K, Novák O, Wei Z, Gou M, Zhang X, Yu Z, Yang H, Cai Y, Strnad M, Liu ChJ (2014) Arabidopsis ABCG14 protein controls the acropetal translocation of root-synthesized cytokinins. Nat. Commun. 5, Art.no. 3274; DOI: 10.1038/ncomms4274

Šmehilová M, Spíchal L (2014) The biotechnological potential of cytokinin status manipulation. In: Nick P, Opatrny Z (eds) Applied Plant Cell Biology, Springer, Berlin, Heidelberg, 103-130; DOI: 10.1007/978-3-642-41787-0_4

Vrána J, Cápal P, Bednářová M, Doležel J (2014) Flow cytometry in plant research: A success story. In: Nick P, Opatrný Z (eds.) Applied Plant Cell Biology, Springer, Berlin, Heidelberg, 395-430; DOI: 10.1007/978-3-642-41787-0_13

Kouřil R, Strouhal O, Nosek L, Lenobel R, Chamrád I, Boekema EJ, Šebela M, Ilík P (2014) Structural characterization of a plant photosystem I and NAD (P) H dehydrogenase supercomplex. Plant J. 77, 568 - 576; DOI:10.1111/tpj.12402

Smékalová V, Doskočilová A, Komis G, Šamaj J (2014) Crosstalk between secondary messengers, hormones and MAPK modules during abiotic stress signalling in plants. Biotechnol. Adv. 32, 2-11; DOI: 10.1016/j.biotechadv.2013.07.009

Ovečka M, Takáč T (2014) Managing heavy metal toxicity stress in plants: Biological and biotechnological tools. Biotechnol. Adv. 32, 73-86; DOI: 10.1016/j.biotechadv.2013.11.011

Bahaji A, Li J, Sánchez-López ÁM, Baroja-Fernández E, Muñoz FJ, Ovečka M, Almagro G, Montero M, Ezquer I, Etxeberria E, Pozueta-Romero J (2014) Starch biosynthesis, its regulation and biotechnological approaches to improve crop yields. Biotechnol. Adv. 32, 87-106; DOI: 10.1016/j.biotechadv.2013.06.006

Doležel J, Vrána J, Cápal P, Kubaláková M, Burešová V, Šimková H (2014) Advances in plant chromosome genomics. Biotechnol. Adv. 32, 122-136; DOI: 10.1016/j.biotechadv.2013.12.011

Mrízová K, Holásková E, Öz MT, Jiskrová E, Frébort I, Galuszka P (2014) Transgenic barley: A prospective tool for biotechnology and agriculture. Biotechnol. Adv. 32, 137-157; DOI: 10.1016/j.biotechadv.2013.09.011

Bergougnoux V (2014) The history of tomato: From domestication to biopharming. Biotechnol. Adv. 32, 170-189; DOI:10.1016/j.biotechadv.2013.11.003

Kopecký D, Studer B (2014) Emerging technologies advancing forage and turf grass genomics. Biotechnol. Adv. 32, 190-199; DOI: 10.1016/j.biotechadv.2013.11.010

Milec Z, Valárik M, Bartoš J, Šafář J (2014) Can a late bloomer become an early bird? Tools for flowering time adjustment. Biotechnol. Adv. 32, 200-214; DOI: 10.1016/j.biotechadv.2013.09.008

Tarkowski P, Vereecke D (2014) Threats and opportunities of plant pathogenic bacteria. Biotechnol. Adv. 32, 215-229; DOI: 10.1016/j.biotechadv.2013.11.001

Chalupová J, Raus M, Sedlářová M, Šebela M (2014) Identification of fungal microorganisms by MALDI-TOF mass spectrometry. Biotechnol. Adv., 230 - 241; DOI: 10.1016/j.biotechadv.2013.11.002

Randhawa M, Bansal U, Valárik M, Klocová B, Doležel J, Bariana H (2014) Molecular mapping of stripe rust resistance gene Yr51 in chromosome 4AL of wheat. Theor. Appl. Genet. 127, 317-324; DOI: 10.1007/s00122-013-2220-8

Barnes BD, Kopecký D, Lukaszewski AJ, Baird JH (2014) Evaluation of turf-type interspecific hybrids of meadow fescue with perennial ryegrass for improved stress tolerance. Crop Sci. 54, 355-365; DOI: 10.2135/cropsci2013.03.0198

Amoo SO, Aremu AO, Moyo M, Szüčová L, Doležal K, Van Staden J (2014) Physiological effects of a novel aromatic cytokinin analogue in micropropagated Aloe arborescens and Harpagophytum procumbens. Plant Cell Tissue Organ Cult. 116, 17-26; DOI: 10.1007/s11240-013-0377-0

Kopel P, Doležal K, Labger V, Jun D, Adam V, Kuca K, Kizek R (2014) Trithiocyanurate complexes of iron, manganese and nickel and their anticholinesterase activity. Molecules 19, 4338 - 4354; DOI: 10.3390/molecules19044338

Aremu AO, Plačková L, Bairu MW, Novák O, Szüčová L, Doležal K, Finnie JF, Van Staden J (2014) Endogenous cytokinin profiles of tissue-cultured and acclimatized 'Williams' bananas subjected to different aromatic cytokinin treatments. Plant Sci. 214, 88-98; DOI : 10.1016/j.plantsci.2013.09.012

Mortier V, Wasson A, Jaworek P, De Keyser A, Decroos M, Holsters M, Tarkowski P, Mathesius U, Goormachtig S. (2014) Role of LONELY GUY genes in indeterminate nodulation on Medicago truncatula. New Phytol. 20, 582-593; DOI: 10.1111/nph.12681

Rastogi A, Yadav DK, Szymańska R, Kruk J, Sedlářová M, Pospíšil P (2014) Singlet oxygen scavenging activity of tocopherol and plastochromanol in Arabidopsis thaliana: Relevance to photooxidative stress. Plant Cell Environ., 392 - 401; DOI: 10.1111/pce.12161

2013

Koprna R, Dundálková L, Spíchal L (2013) Moření jarního ječmene látkami upravujícími hladinu fytohormonů. Úroda 3, 58 - 61; ISSN 0139-6013

Koprna R, Dundálková L, Spíchal L, Valenta R, Spáčilová V (2013) Zvýšení výnosu silážní kukuřice pomocí stimulace růstu. Úroda 4, 17 - 20; ISSN 0139-6013

Koprna R, Dundálková L, Spíchal L, Valenta R, Kostrba V (2013) Výsledky testování komplexních hnojiv s cytokininovým derivátem při pěstování papriky roční. Zahradnictví 7, 12-15; ISSN: 1213-7596

Koprna R, Spíchal L, Dundálková L, Spáčilová V(2013) Fytohormony trochu jinak, aneb jaké jsou možnosti jejich využití v zemědělství. Agromanuál 5, 102-104; ISSN 1801-7673

Černý M, Kuklová A, Hoehenwarter W, Fragner L, Novák O, Rotková G, Jedelský PL, Žáková K, Šmehilová M, Strnad M, Weckwerth W, Brzobohatý B (2013) Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying both dictinct and similar responses to cytokinin down- and up-regulation. J. Exp. Bot. 64, 4193-4206; DOI:10.1093/jxb/ert227

Nair JJ, Rárová L, Strnad M, Bastidad J, van Staden J (2013) Alkaloids from Boophone haemanthoides (Amaryllidaceae). Nat. Prod. Commun. (8), 1705-1710; DOI: will be edited

Pietra S, Gustavsson A, Kiefer C, Kalmbach L, Hörstedt P, Ikeda Y, Stepanova AN, Alonso JM, Grebe M (2013) Arabidopsis SABRE and CLASP interact to stabilize cell division plane orientation and planar polarity. Nat. Commun. 4, Art.no. 2779; DOI: 10.1038/ncomms3779

Wientjes E, Drop B, Kouřil R, Boekema EJ, Croce R (2013) During state 1 to state 2 transition in Arabidopsis thaliana, the photosystem II supercomplex gets phosphorylated but does not disassemble. J. Biol. Chem. 288, 32821 - 32826; DOI: 10.1074/jbc.M113.511691

Karafiátová M, Bartoš J, Kopecký D, Ma L, Sato K, Houben A, Stein N, Doležel J (2013) Mapping nonrecombining regions in barley using multicolor FISH. Chromosome Res. 21: 739-751; DOI: 10.1007/s10577-013-9380-x

Ma J, Stiller J, Berkman PJ, Wei Y, Rogers J, Feuillet C, Doležel J, Mayer KF, Eversole K, Zheng YL, Liu C (2013) Sequence-based analysis of translocations and inversions in bread wheat (Triticum aestivum L.). PLoS ONE 8: e79329; DOI:10.1371/journal.pone.0079329

Breen J, Wicker T, Shatalina M, Frenkel Z, Bertin I, Philippe R, Spielmeyer W, Šimková H, Šafář J, Cattonaro F, Scalabrin S, Magni F, Vautrin S, Berges H, International Wheat Genome Sequencing Consortium, Paux E, Fahima T, Doležel J, Korol A, Feuillet C, Keller B (2013) A physical map of the short arm of wheat chromosome 1A. PLoS ONE 8, e80272; DOI:10.1371/journal.pone.0080272

Martis MM, Zhou R, Haseneyer G, Schmutzer T, Vrána J, Kubaláková M, König S, Kugler KG, Scholz U, Hackauf B, Korzun V, Schön CC, Doležel J, Bauer E, Mayer KFX, Stein N (2013) Reticulate evolution of the rye genome. Plant Cell 25, 3685-3698; DOI: 10.1105/tpc.113.114553

Pont C, Murat F, Guizard S, Flores R, Foucrier S, Bidet Y, Quraishi UM, Alaux M, Doležel J, Fahima T, Budak H, Keller B, Salvi S, Maccaferri M, Steinbach D, Feuillet C, Quesneville H, Salse J (2013) Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo- and neoduplicated subgenomes. Plant J. 76, 1030-1044; DOI: 10.1111/tpj.12366

Ooi SE, Novak O, Dolezal K, Ishak Z, Ong-Abdullah M (2013) Cytokinin Differences in In Vitro Cultures and Inflorescences from Normal and Mantled Oil Palm (Elaeis guineensis Jacq.). J. Plant Growth Regul. 32, 865-874; DOI: 10.1007/s00344-013-9352-6

Raus M, Šebela M (2013) BIOSPEAN: A freeware tool for processing spectra from MALDI intact cell/spore mass spectrometry. J. Proteomics Bioinform. 6, 282-287; DOI: 10.4172/jpb.1000292

Tiwari A, Rác M, Pospíšil P (2013) Formation of superoxide anion and carbon-centered radicals by photosystem II under high light and heat stress-EPR spin-trapping study. J. Bioenerg. Biomembr. 45, 551-559; DOI: 10.1007/s10863-013-9523-y

Rastogi A, Pospíšil P (2013) Ultra-weak photon emission as a non-invasive tool for the measurement of oxidative stress induced by UVA radiation in Arabidospis thaliana. J. Photochem. Photobiol. B-Biol. 123, 59-64; DOI: 10.1016/j.jphotobiol.2013.03.012

Lebeda A, Mieslerová B, Petřivalský M, Luhová L, Špundová M, Sedlářová M, Nožková-Hlaváčková V, Pink DAC (2013) Resistance mechanisms of wild tomato germplasm to infection of Oidium neolycopersici. Eur. J. Plant Pathol., 1-28; DOI 10.1007/s10658-013-0307-3

Pozharitskaya ON, Shikov AN, Makarova MN, Ivanova SA, Kosman VM, Makarov VG, Bazgier V, Berka K, Otyepka M, Ulrichová J (2013) Antiallergic Effects of Pigments Isolated from Green Sea Urchin (Strongylocentrotus droebachiensis) Shells. Planta Med.; DOI: 10.1055/s-0033-1351098

Petrovská B, Jeřábková H, Kohoutová L, Cenklová V, Pochylová Ž, Gelová Z, Kočárová G, Váchová L, Kurejová M, Tomaštíková E, Binarová P (2013) Overexpressed TPX2 causes ectopic formation of microtubular arrays in the nuclei of acentrosomal plant cells. J. Exp. Bot. 64, 4575-4587; DOI:10.1093/jxb/ert271

Kopecký D, Martis M, Číhalíková J, Hřibová E, Vrána J, Bartoš J, Kopecká J, Cattonaro F, Stočes Š, Novák P, Neumann P, Macas J, Šimková H, Studer B, Asp T, Baird JH, Navrátil P, Karafiátová M, Kubaláková M, Šafář J, Mayer K, Doležel, J (2013) Flow sorting and sequencing meadow fescue chromosome 4F. Plant Physiol. 163, 1323-1337; DOI: 10.1104/pp.113.224105

Mrízová K, Jiskrová E, Vyroubalová Š, Novák O, Ohnoutková L, Pospíšilová H, Frébort I, Harwood WA, Galuszka P (2013) Overexpression of Cytokinin Dehydrogenase Genes in Barley (Hordeum vulgare cv. Golden Promise) Fundamentally Affects Morphology and Fertility. PLoS ONE 8, e79029; DOI: 10.1371/journal.pone.0079029

Hlavinka J, Nauš J, Špundová M (2013) Anthocyanin Contribution to Chlorophyll Meter Readings and its Correction. Photosynth Res 118, 277-295; DOI: 10.1007/s11120-013-9934-y

Haider C, Grubinger M, Řezníčková E, Weiss T, Rotheneder H, Miklos W, Berger W, Jorda R, Zatloukal M, Gucký T, Strnad M, Kryštof V, Mikulits W (2013) Novel Inhibitors of Cyclin-Dependent Kinases Combat Hepatocellular Carcinoma without Inducing Chemoresistance. Mol. Cancer Ther. 12, 1947-1957; DOI: 10.1158/1535-7163

Weitensteiner SB, Liebl J, Kryštof V, Havlíček L, Gucký T, Strnad M, Fürst R, Vollmar AM, Zahler S (2013) Trisubstituted Pyrazolopyrimidines as Novel Angiogenesis Inhibitors. PLoS ONE 8, e54607; DOI: 10.1371/journal.pone.0054607

Zatloukal M, Jorda R, Gucký T et al. (2013) Synthesis and in vitro Biological Evaluation of 2,6,9 - Trisubstituted Purines Targeting Multiple Cycylin-Dependent Kinases. Eur. J. Med. Chem. 61, 61-72; DOI: 10.1016/j.ejmech.2012.06.036

Gucký T, Jorda R, Zatloukal M et al. (2013) A Novel Series of Highly Potent 2,6,9 - Trisubstituted Purine Cyclin-Dependent Kinase Inhibitors. J.Med.Chem. 56, 6234-6247; DOI: 10.1021/jm4006884

Grune T, Šebela M (2013) Special issue on "protein modification". J. Proteomics 92, 1; DOI: 10.1016/j.jprot.2013.08.014

Kopečná M, Blaschke H, Kopečný D, Vigouroux A, Končitíková R, Novák O, Kotland O, Strnad M, Moréra S, von Schwartzenberg K (2013) Structure and function of nucleoside hydrolases from Physcomitrella and maize catalyzing hydrolysis of purine, pyrimidine and cytokinin ribosides. Plant Physiol., 113.228775, DOI: 10.1104/pp.113.228775

Bildziukevich U, Rárová L, Saman D, Havlíček L, Drašar P, Wimmer Z (2013) Amides derived from heteroaromatic amines and selected steryl hemiesters. Steroids 78, 1347-1352, DOI: 10.1016/j.steroids.2013.10.003

Magaña-Vergara NE, Rárová L, Soto-Castro D, Farfán N, Strnad M, Santillan R (2013) Synthesis and antiproliferative activity of novel steroidal dendrimer conjugates. Steroids 78, 1254-1262; DOI:10.1016/j.steroids.2013.09.001

Chamrád I, Rix U, Stukalov A, Gridling M, Parapatics K, Müller AC, Altiok S, Colinge J, Superti-Furga G, Haura EB, Bennett KL (2013) A miniturized chemical proteomic approach for target profiling of clinical kinase inhibitors in tumor biopsies. J. Proteome Res. 12, 4005-4017; DOI: 10.1021/pr400309p

Molnár I, Šimková H, Leverington-Waite M, Goram R, Cseh A, Vrána J, Farkas A, Doležel J, Molnár-Láng M, Griffiths S (2013) Syntenic relationships between the U and M genomes of Aegilops, wheat and the model species Brachypodium and rice as revealed by COS markers. PLoS ONE 8, e70844; DOI:10.1371/journal.pone.0070844

Wicker T, Oberhaensli S, Parlange F, Buchmann JP, Shatalina M, Roffler S, Ben-David R, Doležel J, Šimková H, Schulze-Lefert P, Spanu PD, Bruggmann R, Amselem J, Quesneville H, Ver Loren van Themaat E, Paape T, Shimizu KK, Keller B (2013) The wheat powdery mildew genome shows the unique evolution of an obligate biotroph. Nat. Genet. 45, 1092-1096; DOI:10.1038/ng.2704

Aremu AO, Bairu MW, Szüčová L, Doležal K, Finnie JF, Van Staden J (2013) Genetic fidelity in tissue-cultured 'Williams' bananas - the effect of high concentration of topolins and benzyladenine. Sci. Hortic. 161, 324-327; DOI: 10.1016/j.scienta.2013.07.022

Moyo M, Aremu AO, Šubrtová M, Szüčová L, Doležal K, Van Staden J (2013) Conservation strategy for Pelargonium sidoides DC: Phenolic profile and pharmacological activity of acclimatized plants derived from tissue culture. J. Ethnopharmacol. 149, 557-561; DOI: 10.1016/j.jep.2013.07.021

Aremu AO, Gruz J, Šubrtová M, Szüčová L, Doležal K, Bairu MW, Finnie JF, Van Staden J (2013) Antioxidant and phenolic acid profiles of tissue cultured and acclimatized Merwilla plumbea plantlets in relation to the applied cytokinins. J. Plant Physiol. 170, 1303-1308; DOI:10.1016/j.jplph.2013.04.008

Philippe R, Paux E, Bertin I, Sourdille P, Choulet F, Laugier C, Šimková H, Šafář J, Bellec A, Vautrin S, Frenkel Z, Cattonaro F, Magni F, Scalabrin S, Martis MM, Mayer KFX, Korol A, Bergès H, Doležel J, Feuillet C (2013) A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat. Genome Biol. 14, R64; DOI :10.1186/gb-2013-14-6-r64

Takáč T, Pechan T, Šamajová O, Šamaj J (2013) Vesicular trafficking and stress response coupled to PI3K inhibition by LY294002 as revealed by proteomic and cell biological analysis. J. Proteome Res., 4435-4448; DOI: 10.1021/pr400466x

Farkaš P, Čížová A, Bekešová S, Bystrický S (2013) Comparison of EDC and DMTMM efficiency in glycoconjugate preparation. Int. J. Biol. Macromol. 60, 325-327; DOI: 10.1016/j.ijbiomac.2013.06.014

Lazár D (2013) Simulations show that a small part of variable chlorophyll a fluorescence originates in photosystem I and contributes to overall fluorescence rise. J. Theor. Biol. 335, 249-264; DOI: 10.1016/j.jtbi.2013.06.02

Lazár D, Murch SJ, Beilby MJ, Al Khazaaly S (2013) Exogenous melatonin affects photosynthesis in characeae Chara australis. Plant Signal Behav. 8, e23279; DOI: 10.4161/psb.23279

Stirk WA, Bálint P, Tarkowská D, Novák O, Strnad M, Ördög V, van Staden J (2013) Hormone profiles in microalgae: Gibberellius and brassinosteroids. Plant Physiol. Biochem., 70, 348-353; DOI: 10.1016/j.plaphy.2013.05.037

Franc V, Řehulka P, Raus M, Stulík J, Novák J, Renfrow MB, Šebela M (2013) Elucidating heterogeinity of IgA1 hinge-region O-glycosylation by use of MALDI-TOF/TOF mass spectrometry: Role of cysteine alkylation during sample processing. J.Proteomics, 299-312; DOI: 10.1016/j.jprot.2013.07.013

Novák J, Pavlů J, Novák O, Nožková-Hlaváčková V, Špundová M, Hlavinka J, Koukalová Š, Skalák J, Černý M, Brzobohatý B (2013) High cytokinin levels induce a hypersensitive-like response in tobacco. Ann.Bot. 112, 41-55; DOI:10.1093/aob/mct092

Jersáková J, Trávníček P, Kubátová B, Krejčíková J, Urfus T, Liu ZJ, Lamb A, Ponert J, Schulte K, Čurn V, Vrána J, Leitch I J, Suda J (2013) Genome size variation in Orchidaceae subfamily Apostasioideae: filling the phylogenetic gap. Bot. J. Linn. Soc. 172, 95-105; DOI: 10.1111/boj.12027

Hlavinka J, Nauš J, Fellner M (2013) Spontaneous mutation 7B-1 in tomato impairs blue light-induced stomatal opening. Plant Sci. 209, 75-80; DOI: 10.1016/j.plantsci.2013.04.010

Wang X, Shi L, Lin G, Pan X, Chen H, Wu X, Takáč T, Šamaj J, Xu C (2013) A systematic comparison of embryogenic and non-embryogenic cellsof banana (Musa spp. AAA): Ultrastructural, biochemical and cell wallcomponent analyses. Sci. Hortic. 159, 178-185; DOI: 10.1016/j.scienta.2013.05.008

Khripach VA, Tarkowská D, Zhabinskii VN, Gulyakevich OV, Ermolovich YV, Drašar P, Strnad M (2013) Synthesis and Mass Spectral Fragmentation Patterns of Brassinolide Early Biosynthetic Precursors Labeled at C-26. Nat. Prod. Commun. 8, 771 - 774; DOI: -

Motte H, Galuszka P, Spíchal L, Tarkowski P, Plíhal O, Šmehilová M, Jaworek P, Vereecke D, Werbrouck S, Geelen D (2013) Phenyl-Adenine, Identified in a LIGHT-DEPENDENT SHORT HYPOCOTYLS4-Assisted Chemical Screen, Is a Potent Compound for Shoot Regeneration through the Inhibition of CYTOKININ OXIDASE/DEHYDROGENASE Activity. Plant Physiol. 161, 1229-1241; DOI: 10.1104/pp. 112.210716

Plíhal O, Szüčová L, Galuszka P (2013) N9-substituted aromatic cytokinins with negligible side effects on root development are an emerging tool for in vitro culturing. Plant Signal Behav. 8, e24392; DOI: 10.4161/psb.24392

Stirk WA, Ördög V, Novák O, Rolčík J, Strnad M, Bálint P, van Staden J (2013) Auxin and cytokinin relationships in 24 microalgal strain. J. Phycol. 49, 459-467; DOI: 10.1111/jpy.12061

Mrózek L, Coufalová L, Rárová L, Plaček L, Opatřilová R, Dohnal J, Kráľová K, Paleta O, Král V, Drašar P, Jampílek J (2013) New Polyfluorothiopropanoyloxy Derivatives of 5β-Cholan-24-oic Acid Designed as Drug Absorption Modifiers. Steroids, 832-844; DOI: 10.1016/j.steroids.2013.05.012

Hřibová E, Christelová P, Roux N, Doležel J (2013) A simple and robust approach for genotyping in Musaceae. Acta Hort. 986, 241-246; DOI: -

Švubová R, Ovečka M, Pavlovič A, Slováková L, Blehová A (2013) Cuscuta europea plastid apparatus in various developmental stages: Localization of THF1 protein. Plant Signal Behav 8, e24037; DOI:10.4161/psb.24037

Luo M-C, Gu YQ, You FM, Deal KR, Ma Y, Hu Y, Huo N, Wang Y, Wang J, Chen S, Jorgensen CM, Zhang Y, McGuire PE, Pasternak S, Stein JC, Ware D, Kramer M, McCombie WR, Kianian SF, Martis MM, Mayer KFX, Sehgal SK, Li W, Gill BS, Bevan MW, Šimková H, Doležel J, Weining S, Lazo GR, Anderson OD, Dvorak J (2013) A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor. PNAS 110, 7940-7945; DOI:10.1073/pnas.1219082110

Belova T, Zhan B, Wright J, Caccamo M, Asp T, Šimková H, Kent M, Bendixen C, Panitz F, Lien S, Doležel J, Olsen O-A, Sandve SR (2013) Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat. BMC Genomics 14, 222; DOI:10.1186/1471-2164-14-222

Aremu AO, Gruz J, Šubrtová M, Szüčová L, Doležal K, Bairu MW, Finnie JF, Van Staden J (2013) The role of cytokinins on the antioxidant capacity and phenolic acid content during tissue culture and acclimatization of Merwilla plumbea.S. Afr. J. Bot. 86, 172; DOI:10.1016/j.sajb.2013.02.126

Ma L, Jiang S, Lin G, Cai J, Ye X, Chen H, Li M, Li H, Takáč T, Šamaj J, Xu CH (2013) Wound-induced pectin methylesterases enhance banana (Musa spp. AAA) susceptibility to Fusarium oxysporum f. sp. Cubense. J. Exp. Bot., 1-11; DOI:10.1093/jxb/ert088

Franc V, Řehulka P, Padiglia A, Medda R, Floris G, Šebela M (2013) Analysis of the glycosylation pattern of plant copper amine oxidases by MALDI-TOF/TOF mass spectrometry coupled to a manual chromatographic separation of glycans and glycopeptides. Electrophoresis 34, 2357-2367; DOI: 10.1002/elps.201200622

Varshney RK, Song C, Saxena RK, Azam S, Yu S, Sharpe AG, Cannon S, Baek J, Rosen BD, Tar'an B, Millan T, Zhang X, Ramsay LD, Iwata A, Wang Y, Nelson W, Farmer AD, Gaur PM, Soderlund C, Penmetsa RV, Xu C, Bharti AK, He W, Winter P, Zhao S, Hane JK, Carrasquilla-Garcia N, Condie JA, Upadhyaya HD, Luo M-C, Thudi M, Gowda CLL, Singh NP, Lichtenzveig J, Gali KK, Rubio J, Nadarajan N, Doležel J, Bansal KC, Xu X, Edwards D, Zhang G, Kahl G, Gil J, Singh KB, Datta SK, Jackson SA, Wang J, Cook DR (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat. Biotechnol. 31, 240-246, DOI:10.1038/nbt.2491

Kopf S, Viola K, Atanasov AG, Jarukamjorn K, Rárová L, Kretschy N, Teichmann M, Vonach C, Saiko P, Giessrigl B, Huttary N, Raab I, Krieger S, Schumacher M, Diederich M, Strnad M, de Martin R, Szekeres T, Jäger W, Dirsch VM, Mikulits W, Grusch M, Dolznig H, Krupitza G (2013) In vitro characterisation of the anti-intravasative properties of the marine product heteronemin. Arch. Toxicol. 87, 1851-1861 ; DOI: 10.1007/s00204-013-1045-1

Viola K, Kopf S, Rarova L, Jarukamjorn K, Kretschy N, Teichmann M, Vonach C, Atanasov AG, Giessrigl B, Huttary N, Raab I, Krieger S,Strnad M, de Martin R, Saiko P, Szekeres T, Knasmüller S, Dirsch VM, Jäger W Grusch M, Dolznig H, Mikulits W, Krupitza G (2013) Xanthohumol attenuates tumour cell-mediated breaching of the lymphendothelial barrier and prevents intravasation and metastasis.Arch. Toxicol. 78, 435-453;DOI: 10.1007/s00204-013-1028-2

Coufalová L, Mrózek L, Rárová L, Plaček L, Opatřilová R, Dohnal J, Kráľová K, Paleta O, Král V, Drašar P, Jampílek J (2013) New propanoyloxy derivatives of 5ß-cholan-24-oic acid as drug absorption modifiers. Steroids 78, 435-453; DOI: 10.1016/j.steroids.2013.02.001

Pečová M, Šebela M , Marková Z, Poláková K, Čuda J, Šafářová K, Zbořil R (2013) Thermostable trypsin conjugates immobilized to biogenic magnetite show a high operational stability and remarkable reusability for protein digestion. Nanotechnology 24, 125102 ;DOI: 10.1088/0957-4484/24/12/125102

Doležel J, Gill BS (2013) Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat. Plant Physiol 161, 252 - 265; DOI: 10.1104/pp.112.205161

Čížková J, Hřibová E, Humplíková L, Christelová P, Suchánková P, Doležel J (2013) Molecular analysis and genomic organization of major DNA satellites in banana (Musa spp.). PLoS ONE 8, e54808; DOI:10.1371/journal.pone.0054808

Shatalina M, Wicker T, Buchmann JP, Oberhaensli S, Šimková H, Doležel J, Keller, B (2013) Genotype-specific SNP map based on whole chromosome 3B sequence information from wheat cultivars Arina and Forno. Plant Biotechnology Journal 11, 23-32; DOI: 10.1111/pbi.12003

Kopečný D, Končitíková R, Tylichová M, Vigouroux A, Moskalíková H, Soural M, Šebela M, Moréra S (2013) Plant ALDH10 family: Identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate. J. Biol. Chem. 95, 889-902; DOI: 10.1074/jbc.M112.443952

Prasad A, Pospíšil P (2013) Towards the two-dimensional imaging of spontaneous ultra-weak photon emission from microbial, plant and animal cells. Sci Rep 3, 1211; DOI: 10.1038/srep0121

Cuesta C, Novák O, Ordás RJ, Fernández B, Strnad M, Doležal K, Rodríguez A (2012) Endogenous cytokinin profiles and their relationships to between-family differences during adventitious caulogenesis inn Pinus pineaacotyledons. J. Plant Physiol. 169, 1830-1837; DOI: 10.1016/j.jplph.2012.08.012

Čudejková M, Řehulka J, Pěnčík A, Bergougnoux V, Fellner M (2012) Selection of the maize hybrid tolerant to a high dense planting altered cross-talk between blue light and auxin signaling pathways. Curr. Top. Plant Biol..13, 21-34; DOI: - - -

Bóka B, Adányi N, Virág D, Frébort I, Kiss A (2013) Enzyme based amperometric biosensor for adenine determination. Electroanalysis 25, 237-242; DOI: 10.1002/elan.201200387

Zwanenburg B, Pospíšil T (2013) Structure and activity of strigolactones, New plant hormones with a rich future. Mol. Plant. 6, 38-62; DOI: 10.1093/mp/sss141

Šamajová O, Komis G, Šamaj J (2013) Emerging topics in the cell biology of mitogen-activated protein kinases. Trends Plant Sci. 18, 140-148; DOI: 10.1016/j.tplants.2012.11.004

Pospíšková K, Šafařík I, Šebela M, Kuncová G (2013) Magnetic particles based biosensor for biogenic amines using an optical oxygen sensor as a transducer. Microchim. Acta 180, 311-318; DOI: 10.1007/s00604-012-0932-0

Kubienová L, Kopečný D, Tylichová M, Briozzo P, Skopalová J, Šebela M, Navrátil M, Tâche R, Luhová L, Barroso JB, Petřivalský M (2013) Structural and functional characterization of a plant S-nitrosoglutathione reductase fromm Solanum lycopersicumm. Biochimie 95,889-902; DOI: 10.1016/j.biochi.2012.12.009

Havlíková M, Huličiak M, Bazgier V, Berka K, Kubala M (2013) Fluorone dyes have binding sites on both cytoplasmic and extracellular domains of Na,K-ATPase. Biochim. Biophys. Acta-Biomembr. 1828, 568-576; DOI: 10.1016/j.bbamem.2012.10.029DOI: 10.1016/j.bbamem.2012.10.029

Wasternack C, Forner S,Strnad M, Hause B (2013) Jasmonates in flower and seed development. Biochimie 95, 79-85; DOI:10.1016/j.biochi.2012.06.005,

Malá J, Máchová P, Cvrčková H, Karady M, Novák O, Mikulík J, Dostál J, Strnad M, Doležal K (2013) The role of cytokinins during micropropagation of wych elm. Biologia Plantarum 57, 174-178; DOI:10.1007/s10535-012-0252-6

Brocker C, Vasiliou M, Carpenter S, Carpenter C, Zhang Y, Wang X, Kotchoni SO, Wood AJ, Kirch H, Kopečný D, Nebert DW, Vasiliou V (2013) Aldehyde dehydrogenase (ALDH) superfamily in plants: gene nomenclature and comparative genomics. Planta 236, 189-210; DOI: 10.1007/s00425-012-1749-0

Hulvová H, Galuszka P, Frébortová J, Frébort I (2013) Parasitic funguss Clavicepssas a source for biotechnological production of ergot alkaloids. Biotechnol. Adv. 31, 79-89; DOI:10.1016/j.biotechadv.2012.01.005

Zalabák D, Pospíšilová H, Šmehilová M, Mrízová K, Frébort I, Galuszka P (2013) Genetic engineering of cytokinin metabolism: Prospective way to improve agricultural traits of crop plants. Biotechnol. Adv. 31, 97-117; DOI:10.1016/j.biotechadv.2011.12.003

Šamajová O, Plíhal O, Al-Yousif M, Hirt H, Šamaj J (2013) Improvement of stress tolerance in plants by genetic manipulation of mitogen-activated protein kinases. Biotechnol. Adv. 31, 118-128;DOI:10.1016/j.biotechadv.2011.12.002DOI:10.1016/j.biotechadv.2011.12.002

Raus M, Kopečný D, Šebela M(2013) Program application for the prediction of results of protein digestion by proteolytic enzymes. Chemické listy 107, 44-533

Pechanova O,Takáč T, Šamaj J, Pechan T (2013) Maize proteomics: an insight to biology of important cereal crop. Proteomics 13, 637-662; DOI: 10.1002/pmic.201200275

Kouřil R, Wientjes E, Bultema JB, Croce R, Boekema EJ (2013) High-light vs. low-light: Effect of light acclimation on photosystem II composition and organization in Arabidopsis thaliana. Biochim. Biophys. Acta-Bioenerg. 1827, 411-419 ; DOI: 10.1016/j.bbabio.2012.12.003

2012

Koprna R, Dundálková L, Spíchal L, Strnad M, Svobodová I, Spáčilová V, Valenta R (2012) Aktuální výsledky aplikace cytokininových derivátů v jarním ječmeni. Current results of cytokinin derivatives application on spring barley. Aktuální poznatky v pěstování, šlechtění a ochraně rostlin a zpracování produktů, Úroda 12, 303-306; ISSN 0139-6013

Koprna R, Spíchal L, Strnad M, Nisler J (2012) Perspektivy využití růstových regulátorů. Úroda 6, 47 - 49; ISSN 0139-6013

Šamajová O, Takáč T, Wangenheim D, Stelzer E, Šamaj J (2012) Update on methods and techniques to study endocytosis in plants. In: Šamaj J (ed) Endocytosis in plants, Springer, Berlin, Heidelberg, 1-36; DOI:10.1007/978-3-642-32463-5_1

Ovečka M, Illés P, Lichtscheidl I, Derksen J, Šamaj J (2012) Endocytosis and vesicular recycling in root hairs and pollen tubes. In: Šamaj J (ed) Endocytosis in plants, Springer, Berlin, Heidelberg, 81-106; DOI:10.1007/978-3-642-32463-5_4

Fulopova V, Gucky T, Grepl M, Soural M (2012) Solid-phase synthesis of trisubstituted benzo [1,4] - diazepin -5-one derivates. Acs Comb Sci 14, 651-656; DOI: 10.1021/co300124q

Bergougnoux V, Zalabák D, Jandová M, Novák O, Wiese-Klinkenberg A, Fellner M (2012) Effect of blue light on endogenous isopentenyladenine and endoreduplication during photomorphogenesis and de-etiolation of tomato (Solanum lycopersicum L.) seedlings. PLoS ONE 7, e45255; DOI: 10.1371/journal.pone.0045255

Richer H, Lieberei R, Strnad M, Novák O, Grúz J, Rensing SA, von Schwarzenberg K (2012) Polyphnins in germination and seedling enol oxidases in Physcomitrella: functional PPO1 knockout modulates cytokinin-dependent developmentin the moss Physcomitrella patens. J Exp Bot 63, 5121-5135; DOI: 10.1093/jxb/ers169

Voegle A, Graeber K, Oracz K, Tarkowska D, Jacquemoud D, Turečková V, Urbanová T, Strnad M , Leubner-Metzger G (2012) Ebryo growth, testa permeability, and endosperm weakeing major targets for the environmentally regulated inhibition of Lepidium sativum seed germination by myrigalone A. J Exp Bot 63, 5337-5350; DOI: 10.1093/jxb/ers197

Stirk WA, Václavíková K, Novák O, Gajdošová S, Kotland O, Motyka V, Strnad M , van Staden J (2012) Involvement of cis-zeatin, dihydrozeatin, and aromatic cytokinins in germination and seedling establishment of maize, oats, and lucerne. J Plant Growth Regul 31, 392-405; DOI: 10.1007/s00344-011-9249-1

Blavet N, Blavet H, Cegan R, Zemp N, Zdanska J, Janoušek B, Hobza R , Widmer A (2012) Comparative analysis of a plant pseudoautosomal region (PAR) in Silene latifolia with the corresponding S-vulgaris autosome. BMC Genomics 13, Art. No: 226; DOI: 10.1186/1471-2164-13-226

Podwyszyńska M, Węgrzynowicz-Lesiak E, Doležal K, Krekule J, Strnad M, Saniewski M (2012) New cytokinins - meta-methoxytopolins in micropropagation of Cotinus coggygria Scop. 'Royal Purple'. Propag. Ornam. Plants 12, 220-228; DOI: - (link here)

Chan T, Shimizu Y, Pospíšil P, Nijo N, Fujiwara A, Taninaka Y, Ishikawa T, Hori H, Nanba D, Imai A, Morita N, Yoshioka-Nishimura M, Izumi Y, Yamamoto Y, Kobayashi H, Mizusawa N, Wada H, Yamamoto Y (2012) Quality control of photosystem II: lipid peroxidation accelerates photoinhibition under excessive illumination. PLoS ONE 7, e52100; DOI: 10.1371/journal.pone.0052100

Bielach A, Podlešáková K, Marhavy P, Duclercq J, Cuesta C, Müller B, Grunewald W, Tarkowski P, Benková E (2012) Spatiotemporal regulation of lateralroot organogenesis in Arabidopsis by cytokinin. Plant Cell 24, 3967-3981; DOI: 10.1105/tpc.112.103044

Bartoš J, Vlček Č, Choulet F, Džunková M, Cviková K, Šafář J, Šimková H, Pačes J, Strnad H, Sourdille P, Bergés H, Cattonaro F, Feuillet C, Doležel J(2012) Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat. BMC Plant Biol. 12, 155; DOI: 10.1186/1471-2229-12-155

Rastogi A, Pospíšil P (2012) Production of hydrogen peroxide and hydroxyl radical in potato tuber during the necrotrophic phase of hemibiotrophic pathogen Phytophthora infestans infection. J. Photochem. Photobiol. B-Biol. 117, 202-206; DOI: 10.1016/j.jphotobiol.2012.10.001

Kvasnica M, Rárová L, Oklešťková J, Buděšínský M, Kohout L (2012) Synthesis and cytotoxic activities of estrone and estradiol cis-dichloroplatinum(II) complexes. Bioorg. Med. Chem. 20, 6969-6978; DOI: 10.1016/j.bmc.2012.10.013

Béres T, Gemrotová M, Tarkowski P Béres T, Gemrotová M, Tarkowski P, Ganzera M, Maier V, Friedecký D, Dessoy MA, Wessjohann LA, Spíchal L, Strnad M, Doležal K(2012) Analysis of cytokinin nucleotides by capillary zone electrophoresis with diode array and mass spectrometric detection in a recombinant enzymee in vitrooreaction. Anal. Chim. Acta 751, 176-181; DOI: 10.1016/j.aca.2012.08.049

Wasternack C, Goetz S, Hellwege A, Forner S, Strnad M, Hause B (2012) Another JA/COI1-independent role of OPDA detected in tomato embryo development. Plant Signal. Behav. 7, 1349 - 1353; DOI: 10.4161/psb.21551

Prokudina EA, Havlíček L, Al-Maharik N, Lapčík O, Strnad M, Grúz J (2012) Rapid UPLC-ESI-MS/MS method for the analysis of isoflavonoids and other phenylpropanoids . J. Food Compos. Anal. 26, 36-42; DOI: 10.1016/j.jfca.2011.12.001

Šamec D, Kremer D, Grúz J, Grubešić RJ, Piljac-Žegarac J (2012) Rhamnus intermediaaSteud. et Hochst. - A new source of bioactive phytochemicals. Croat. Chem. Acta 85, 125-129; DOI: 10.5562/cca1946

Ding ZJ, Wang BJ, Moreno I, Dupláková N, Simon S, Carraro N, Reemmer J, Pěnčík A, Chen X, Tejos R, Skupa P, Pollmann S, Mravec J, Petrášek J, Zažímalová E, Honys D, Rolčík J, Murphy A, Orellana A, Geisler M, Friml J (2012) ER-localized auxin transporter PIN8 regulates auxin homeostasis and male gametophyte development inn Arabidopsiss. Nat. Commun. 3, Article number 941; DOI: 10.1038/ncomms1941

Yadav DK, Pospíšil P(2012) Evidence on the formation of singlet oxygen in the donor side photoinhibition of photosystem II: EPR spin-trapping study. PLoS ONE 7, e45883; DOI: 10.1371/journal.pone.0045883

Prasad A, Pospíšil P(2012) Ultraweak photon emission induced by visible light and ultraviolet A radiation via photoactivated skin chromophores: in vivoocharge coupled device imaging. J. Biomed. Opt. 17, 085004; DOI: 10.1117/1.JBO.17.8.085004

Nie X, Li B, Wang L, Liu P, Biradar SS, Li T, Doležel J, Edwards D, Luo M, Weining S (2012) Development of chromosome-arm-specific microsatellite markers inn Triticum aestivumm (Poaceae) using NGS technology. Am. J. Bot. 9, e369-e371; DOI: 10.3732/ajb.1200077

Martis M, Klemme S, Banaei-Moghaddam AM, Blattner FR, Macas J, Schmutzer T, Scholz U, Gundlach H, Wicker T, Šimková H, Novák P, Neumann P, Kubaláková M, Bauer E, Haseneyer G, Fuchs J, Doležel J, Stein N, Mayer KFX, Houben A (2012) Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences. PNAS 109, 13343-13346; DOI: 10.1073/pnas.1204237109

Sehgal SK, Li W, Rabinowicz PD, Chan A, Šimková H, Doležel J, Gill BS (2012) Chromosome arm-specific BAC end sequences permit comparative analysis of homoeologous chromosomes and genomes of polyploid wheat. BMC Plant Biol. 12, 64; DOI: 10.1186/1471-2229-12-64

Kantar M, Akpinar BA, Valárik M, Lucas SJ, Doležel J, Hernández P, Budak H (2012) Subgenomic analysis of microRNAs in polyploid wheat. Funct. Integr. Genomics 12, 465-479; DOI: 10.1007/s10142-012-0285-0

Doležel J, Vrána J, Šafář J, Bartoš J, Kubaláková M, Šimková H(2012) Chromosomes in the flow to simplify genome analysis. Funct. Integr. Genomics 12, 397-416; DOI: 10.1007/s10142-012-0293-0

Vrána J, Šimková H, Kubaláková M, Číhalíková J, Doležel JJ(2012) Flow cytometric chromosome sorting in plants: The next generation. Methods 57, 331-337; DOI:10.1016/j.ymeth.2012.03.006

Ovecka M, Bahaji A, Muńoz FJ, Almagro G, Ezquer I, Baroja-Fernández E, Li J, Pozueta-Romero J (2012) A sensitive method for confocal fluorescence microscopic visualization of starch granules in iodine stained samples. Plant Signal. Behav. 7, 1146 - 1150; DOI: 10.4161/psb.21370

Rárová L, Zahler S, Liebl J, Kryštof V, Sedlák D, Bartůněk P, Kohout L, Strnad M(2012) Brassinosteroids inhibitt in vitrooangiogenesis in human endothelial cells. Steroids 77, 1502 - 1509; DOI:10.1016/j.steroids.2012.08.01

Dolečková I, Rárová L, Grúz J, Vondrusová M, Strnad M, Kryštof V (2012) Antiproliferative and antiangiogenic effects of flavone eupatorin, an active constituent of chloroform extract off Orthosiphon stamineuss leaves. Fitoterapia 83, 1000-1007; DOI: 10.1016/j.fitote.2012.06.002

Steigerová J, Rárová L, Oklešt'ková J, Křížová K, Levková M, Šváchová M, Kolář Z, Strnad M(2012) Mechanisms of natural brassinosteroid-induced apoptosis of prostate cancer cells. Food Chem. Toxicol. 50, 4068-4076; DOI:10.1016/j.fct.2012.08.031

Nair J, Rárová L, Strnad M, Bastida J, van Staden J (2012) Apoptosis-inducing effects of distichamine and narciprimine, rare alkaloids of the plant family Amaryllidaceae. Bioorg. Med. Chem. Lett. 22, 6195-6199; DOI:10.1016/j.bmcl.2012.08.005

Vida N, Svobodová H, Rárová L, Drašar P, Šaman D, Cvačka J, Wimmer Z (2012) Polyamine conjugates of stigmasterol. Steroids 77, 1212-1218; DOI:10.1016/j.steroids.2012.07.009

Ohnoutková L, Zítka O, Mrízová K, Vašková J, Galuszka P, Cernei N, Smedley MA, Harwood WA, Adam V, Kizek R (2012) Electrophoretic and chromatographic evaluation of transgenic barley expressing a bacterial dihydrodipicolinate synthase. Electrophoresis 33, 2365-2373; DOI:10.1002/elps.201200033

Tomaštíková E, Cenklová V, Kohoutová L, Petrovská B, Váchová L, Halada P, Kočárová G, Binarová P (2012) Interactions of annArabidopsissRanBPM homologue with LisH-CTLH domain proteins revealed high conservation of CTLH complexes in eukaryotes. BMC Plant Biol. 12, 83; DOI:10.1186/1471-2229-12-83

Aremu AO, Bairu MW, Szüčová L, Doležal KK, Finnie JF, Van Staden J (2012) Assessment of the role off metaa-topolins on in vitro produced phenolics and acclimatization competence of micropropagated 'Williams' banana. Acta Physiol. Plant. 34, 2265-2273; DOI:10.1007/s11738-012-1027-6

Aremu AO, Bairu MW, Szüčová L, Finnie JF, Van Staden J (2012) The role off metaa-topolins on the photosynthetic pigment profiles and foliar structures of micropropagated 'Williams' bananas. J. Plant Physiol. 169, 1530-1541; DOI:10.1016/j.jplph.2012.06.006

Aremu AO, Bairu MW, Novák O, Plačková L, Zatloukal M, Doležal K, Finnie JF, Strnad M, Van Staden J (2012) Physiological responses and endogenous cytokinin profiles of tissue-cultured 'Williams' bananas in relation to roscovitine and an inhibitor of cytokinin oxidase/dehydrogenase (INCYDE) treatments. Planta 236, 1775-1790; DOI:10.1007/s00425-012-1721-z

Habib SH, Ooi S-E, Novák O, Tarkowská D, Rolčík J,Doležal K, Syed-Alwee SSR, Ho C-L, Namasivayam P (2012) Comparative mineral and hormonal analyses of wild type and TLS somaclonal variant derived from oil palm ((Elaeis guineensiss Jacq. var. tenera) tissue culture. Plant Growth Regul. 68, 313-317; DOI:10.1007/s10725-012-9707-1

Ma L, Xie L, Lin G, Jiang S, Chen H, Li H, Takáč T, Šamaj J, Xu C (2012) Histological changes and differences in activities of some antioxidant enzymes and hydrogen peroxide content during somatic embryogenesis off MusaaAAA cv. Yueyoukang 1. Sci. Hortic. 144, 87-92; DOI:10.1016/j.scienta.2012.06.039

Jakobson I, Reis D, Tiidema A, Peusha H, Timofejeva L, Valárik M, Kladivová M, Šimková H, Doležel J, Järve K (2012) Fine mapping, phenotypic characterization and validation of non-race-specific resistance to powdery mildew in a wheat--Triticum militinaeeintrogression line. Theor. Appl. Genet. 125, 609-623; DOI:10.1007/s00122-012-1856-0

Ježilová E, Fellner M, Bergougnoux V, Špundová M(2012) Is the rate of photosynthesis under blue light altered in thee 7B-11tomato mutant? Photosynthetica 50, 477-480; DOI:10.1007/s11099-012-0047-1

D'Hont A, Denoeud F, Aury JM, Baurens FC, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M, Da Silva C, Jabbari K, Cardi C, Poulain J, Souquet M, Labadie K, Jourda C, Lengellé J, Rodier-Goud M, Alberti A, Bernard M, Correa M, Ayyampalayam S, Mckain MR, Leebens-Mack J, Burgess D, Freeling M, Mbéguié-A-Mbéguié D, Chabannes M, Wicker T, Panaud O, Barbosa J, Hribova E, Heslop-Harrison P, Habas R, Rivallan R, Francois P, Poiron C Kilian A, Burthia D, Jenny C, Bakry F, Brown S, Guignon V, Kema G, Dita M, Waalwijk C, Joseph S, Dievart A, Jaillon O, Leclercq J, Argout X, Lyons E, Almeida A, Jeridi M, Dolezel J, Roux N, Risterucci AM, Weissenbach J, Ruiz M, Glaszmann JC, Quétier F, Yahiaoui N, Wincker P (2012) The banana (Musa acuminataa) genome and the evolution of monocotyledonous plants. Nature 488, 213-217; DOI:10.1038/nature11241

Kováčik J, Klejdus B, Hedbavny J, Štork F, Grúz J(2012) Modulation of copper uptake and toxicity by abiotic stresses inn Matricaria chamomillaaplants. J. Agric. Food Chem. 60, 6755-6763; DOI:10.1021/jf3013426

Novák O, Hényková E, Sairanen I, Kowalczyk M, Pospíšil T, Ljung K (2012) Tissue specific profiling of thee Arabidopsis thalianaaauxin metabolome. Plant J. 72, 523 - 536; DOI:10.1111/j.1365-313X.2012.05085.x

Chen T, Wang X, von Wangenheim D, Zheng M, Šamaj J, Ji W, Lin J (2012) Probing and tracking organelles in living plant cells. Protoplasma 249 (Suppl 2), 157-167; DOI:10.1007/s00709-011-0364-4, Erratum: DOI:10.1007/s00709-012-0376-8

Chalupová J, Sedlářová M, Helmel M, Řehulka P, Marchetti-Deschmann M, Allmaier G, Šebela M(2012) MALDI-based intact spore mass spectrometry of downy and powdery mildews. J. Mass Spectrom. 47, 978-986; DOI:10.1002/jms.3046

Svačinová J, Novák O, Plačková L, Lenobel R, Holík J, Strnad M, Doležal K(2012) A new approach for cytokinin isolation from Arabidopsis tissues using miniaturized purification: pipette tip solid-phase extraction. Plant Methods 8, 17; DOI:10.1186/1746-4811-8-17

Podlešáková K, Zalabák D, Čudejková M, Plíhal O, Szüčová L, Doležal K, Spíchal L, Strnad M, Galuszka P (2012) Novel Cytokinin Derivatives Do Not Show Negative Effects on Root Growth and Proliferation in Submicromolar Range. PLoS ONE 7(6): e39293; DOI:10.1371/journal.pone.0039293

Aremu AO, Bairu MW, Szüčová L, Doležal K, Finnie JF, Van Staden J (2012) Shoot and root proliferation in 'Williams' banana: are the topolins better cytokinins? Plant Cell Tissue Organ Cult. 111, 209-218; DOI:10.1007/s11240-012-0187-9

Spíchal L(2012) Cytokinins - recent news and views of evolutionally old molecules. Funct. Plant Biol. 39, 267-284; DOI:10.1071/FP11276

Kapras V, Slavíčková A, Šťastná E, Vyklický L, Vales K, Chodounská H (2012) Synthesis of deuterium labeled NMDA receptor inhibitor - 20-Oxo-55ß-[9,12,12-²H₃]pregnan-33?-yl-L-glutamyl 1-ester. Steroids 77, 282-287; DOI:10.1016/j.steroids.2011.12.019

Kováčik J, Grúz J, Klejdus B, Štork F, Hedbavny J (2012) Accumulation of metals and selected nutritional parameters in the field-grown chamomile anthodia. Food Chem. 131, 55-62; DOI:10.1016/j.foodchem.2011.08.028

Brcko A, Pěnčík A, Magnus V, Prebeg T, Mlinarić S, Antunović J, Lepeduš H, Cesar V, Strnad M, Rolčík J, Salopek-Sondi B (2012) Endogenous auxin profile in the Christmas rose (Helleborus nigerrL.) Flower and fruit: free and amide conjugated IAAJ. Plant growth regul. 31, 63-78; DOI:10.1007/s00344-011-9220-1

Lukaszewski AJ, Kopecký D, Linc G (2012) Inversions of chromosome arms 4AL and 2BS in wheat invert the patterns of chiasma distribution. Chromosoma 121, 201-208; DOI:10.1007/s00412-011-0354-5

Tarkowská D, Filek M, Biesaga-Kościelniak J, Marcińska I, Macháčková I, Krekule J, Strnad M(2012) Cytokinins in shoot apices offBrassica napussplants during vernalization. Plant Sci. 187, 105-112; DOI:10.1016/j.plantsci.2012.02.003

Kováčik J, Štork F, Klejdus B, Grúz J, Hedbavny J (2012) Effect of metabolic regulators on aluminium uptake and toxicity innMatricaria chamomillaa plants. Plant Physiol. Biochem. 54, 140-148; DOI:10.1016/j.plaphy.2012.02.018

Hlavinka J, Nožková-Hlaváčková VV, Floková K, Novák O, Nauš J(2012) Jasmonic acid accumulation and systemic photosynthetic and electrical changes in locally burned wild type tomato, ABA-deficientt sitienssmutants andd sitiensspre-treated by ABA. Plant Physiol. Biochem. 54, 89-96; DOI:10.1016/j.plaphy.2012.02.014

Stirk WA, Novák O, Žižková E, Motyka V, Strnad M,van Staden J (2012) Comparison of endogenous cytokinins and cytokinin oxidase/dehydrogenase activity in germinating and thermoinhibitedd Tagetes minutaa achenes. J. Plant Physiol. 169, 696-703; DOI:10.1016/j.jplph.2012.01.013

Long CL, Held M, Hayward A, Nisler J, Spíchal L, Emery RJN, Moffatt BA, Guinel FC (2012) Seed development, seed germination and seedling growth in the R500 (sym16))pea mutant are not directly linked to altered cytokinin homeostasis. Physiol. Plant. 145, 341-359; DOI: 10.1111/j.1399-3054.2012.01594.x

Borovská J, Vyklický V, Šťastná E, Kapras V, Slavíková B, Horák M, Chodounská H, Vyklický L Jr (2012) Access of inhibitory neurosteroids to the NMDA receptor. Br. J. Pharmacol. 166, 1069-1083; DOI:10.1111/j.1476-5381.2011.01816.x

Kenderešová L, Staňová A, Pavlovkin J, Ďurišová E,Nadubinská M, Čiamporová M, Ovečka M(2012) Early Znn²⁺⁺-induced effects on the membrane potential account for primary heavy metal susceptibility in tolerant and sensitivee Arabidopsissspecies. Ann. Bot. 110, 445-459; DOI:10.1093/aob/mcs111

Franc V, Šebela M, Řehulka P, Končitíková R, Lenobel R, Madzak C, Kopečný D(2012) Analysis off N-glycosylation in maize cytokinin oxidase/dehydrogenase 1 using a manual microgradient chromatographic separation coupled offline to MALDI-TOF/TOF mass spectrometry. J. Proteomics 75, 4027-4037; DOI: 10.1016/j.jprot.2012.05.013

Frömmel J, Soural M, Tylichová M, Kopečný D, Demo G, Wimmerová M, Šebela M(2012) Plant aminoaldehyde dehydrogenases oxidize a wide range of nitrogenous heterocyclic aldehydes. Amino Acids, 505-516; DOI: 10.1007/s00726-011-1174-x

Staňová A, Ďurišová E, Banásová V, Gurinová E, Nadubinská M, Kenderešová L, Ovečka M, Čiamporová M (2012) Root system morphology and primary root anatomy in natural non-metallicolous and metallicolous populations of threee Arabidopsissspecies differing in heavy metal tolerance. Biologia 67, 505-516; DOI:10.2478/s11756-012-0040-y

Li R, Liu P, Wan Y, Chen T, Wang Q, Mettbach U, Baluška F,Šamaj J, Fang X, Lucas WJ, Lin J (2012) A membrane microdomain-associated protein, AtFlot1, is involved in a clathrin-independent endocytic pathway and is required for seedling development innArabidopsiss. Plant Cell 24, 2105-2122; DOI:10.1105/tpc.112.095695

Takáč T, Pechan T, Šamajová O, Ovečka M, Richter H, Eck C, Niehaus K, Šamaj J(2012) Wortmannin Treatment Induces Changes in Arabidopsis Root Proteome and Post-Golgi Compartments. J. Proteome Res. 11, 3127-3142; DOI:10.1021/pr201111n

Barbez E, Kubeš M, Rolčík J, Béziat C, Pěnčík A, Wang B, Rosquete MR, Zhu J, Dobrev PI, Lee Y, Zažímalová E, Petrášek J, Geisler M, Friml J, Kleine-Vehn J (2012) A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants. Nature 485, 119-122; DOI:10.1038/nature11001

Kasparek P, Krenek P, Buryova H, Suchanova S, Beck IM, Sedlacek R (2012) Transgenic mouse model expressing tdTomato under involucrin promoter as a tool for analysis of epidermal differentiation and wound healing. Transgenic Res. 21, 683-689 ; DOI: 10.1007/s11248-011-9567-x

Unger C, Popescu R, Giessrigl B, Rarova L, Herbacek I, Seelinger M, Diaz R, Wallnöfer B, Fritzer-Szekeres M, Szekeres T, Frisch R,Doležal K, Strnad M, De Martin R, Grusch M, Kopp B, Krupitza G (2012) An apolar extract of Critonia morifolia inhibits c-Myc, cyclin D1, Cdc25A, Cdc25B, Cdc25C and Akt and induces apoptosis. Int. J. Oncol. 40, 2131-2139; DOI:10.3892/ijo.2012.1412

Wendel JF, Greilhuber J, Doležel J, Leitch IJ (eds.) (2012) Plant Genome Diversity, Vol. 1, pp. 279; Springer, ISBN 978-3-7091-1129-1

Lucas SJ, Šimková H, Šafář J, Jurman I, Cattonaro F, Vautrin S, Bellec A, Berges H, Doležel J, Budak H (2012) Functional features of a single chromosome arm in wheat (1AL) determined from its structure. Funct. Integr. Genomics 12, 173-182; DOI:10.1007/s10142-011-0250-3

Tomaszewski C, Byrne SL, Foito A, Kildea S, Kopecký D, Doležel J, Heslop-Harrison JS, Stewart D, Barth S (2012) Genetic linkage mapping in an F2 perennial ryegrass population using DArT markers. Plant Breeding 131, 345-349; DOI:10.1111/j.1439-0523.2011.01944.x

Yadav DK, Pospíšil P(2012) Role of chloride ion in hydroxyl radical production in photosystem II under heat stress: Electron paramagnetic resonance spin-trapping study. J. Bioenerg. Biomembr. 44, 365-372; DOI:10.1007/s10863-012-9433-4

Sinha RK, Komenda J, Knoppová J, Sedlářová M, Pospíšil P(2012) Small CAB-like proteins prevent formation of singlet oxygen in the damaged Photosystem II complex of the cyanobacteriummSynechocystis sp.. PCC 6803. Plant Cell Environ 35, 806-818; DOI:10.1111/j.1365-3040.2011.02454.x

Cegan R, Vyskot B, Kejnovsky E, Kubat Z, Blavet H, Šafář J, Doležel J, Blavet N, Hobza R (2012) Genomic diversity in two related plant species with and without sex chromosomes - Silene latifoliaa andd S. vulgariss. PLoS ONE 7(2): e31898; DOI:10.1371/journal.pone.0031898

Berkman PJ, Skarshewski A, Manoli S, Lorenc MT, Stiller J, Smits L, Lai K, Campbell E, Kubaláková M, Šimková H, Batley J,Doležel J, Hernandez P, Edwards D (2012) Sequencing wheat chromosome arm 7BS delimits the 7BS/4AL translocation and reveals homoeologous gene conservation. Theor. Appl. Genet. 124, 423-432; DOI:10.1007/s00122-011-1717-2

Fluch S, Kopecky D, Burg K, Šimková H, Taudien S, Petzold A, Kubaláková M, Platzer M, Berenyi M, Krainer S, Doležel J, Lelley T (2012) Sequence composition and gene content of the short arm of ryee(Secale cereale))chromosome 1. PLoS ONE 7(2): e30784; DOI:10.1371/journal.pone.0030784

Pérez-Díaz JOH, Rárová L, Munoz Ocampo JP, Magana-Vergara NE, Farfán N, Strnad M, Santillán R (2012) Synthesis and Biological activity of 23-Ethylidene-26-hydroxy-22-oxocholestane derivatives from spirostanic sapogenins. Eur. J. Med. Chem. 51, 67-78; DOI:10.1016/j.ejmech.2012.02.020

Pospíšil P(2012) Molecular mechanisms of production and scavenging of reactive oxygen species by photosystem II. Biochim. Biophys. Acta 1817, 218-231; DOI:10.1016/j.bbabio.2011.05.017

Petrovská B, Cenklová V, Pochylová Z, Kourová H, Doskočilová A, Plíhal O, Binarová L, Binarová P (2012) Plant Aurora kinases play a role in maintenance of primary meristems and control of endoreduplication. New Phytol. 193, 590-604; DOI:10.1111/j.1469-8137.2011.03989.x

Hernandez P, Martis M, Dorado G, Pfeifer M, Gálvez S, Schaaf S, Jouve N, Šimková H, Valárik M, Doležel J, Mayer KFX (2012) Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content. Plant J. 69, 77-386; DOI:10.1111/j.1365-313X.2011.04808.x

Baird JH, Kopecký D, Lukaszewski AJ, Green RL, Bartoš J, Doležel J(2012) Genetic diversity of turf-type tall fescue using diversity arrays technology. Crop Sci. 52, 408-412; DOI:10.2135/cropsci2011.02.0106

Uváčková Ľ, Takáč T, Boehm N, Obert B, Šamaj J(2012) Proteomic and biochemical analysis of maize anthers after cold pretreatment and induction of androgenesis reveals an important role of anti-oxidative enzymes. J. Proteomics 75, 1886-1894; DOI:10.1016/j.jprot.2011.12.033

Bleho J, Obert B, Takáč T, Petrovská B, Heym C, Menzel D, Šamaj J(2012) ER disruption and GFP degradation during non-regenerable transformation of flax withh Agrobacterium tumefacienss. Protoplasma 249, 53-63; DOI: 10.1007/s00709-010-0261-2

Aremu AO, Bairu MW, Doležal K, Finnie JF, Van Staden J (2012) Topolins: A panacea to plant tissue culture challenges? Plant Cell Tissue Organ Cult. 108, 1-166; DOI:10.1007/s11240-011-0007-7

2011

Koprna R, Spíchal L, Strnad M (2011) Výsledky aplikací cytokininového derivátu INCYDE na polních plodinách. Aktuální poznatky v pěstování, šlechtění a ochraně rostlin a zpracování produktů, Úroda 12, 363-366; ISSN 0139-6013

The average impact factor of the magazines that published papers from the Centre of Region Hana was 3,954 in 2011. Magazines with the highest impact factor (based on results from 2010) were Current Opinion in Plant Biology (IF 9,437) and Plant Cell (IF 9,396) in which three articles were published.

Rustenholz C, Choulet F, Laugier C, Šafář J, Šimková H, Doležel J, Magni F, Scalabrin S, Cattonaro F, Vautrin S, Bellec A, Berges H, Feuillet C, Paux E (2011) A 3000-loci transcription map of chromosome 3B unravels the structural and functional features of gene islands in hexaploid wheat. Plant Physiol. 157, 1596-1608; DOI:10.1104/pp.111.183921

Prasad A, Pospíšil P (2011) Two-dimensional imaging of spontaneous ultra-weak photon emission from the human skin: role of reactive oxygen species. J. Biophotonics 4, 840-849; DOI:10.1002/jbio.201100073

Karady M, Novák O, Horna A, Strnad M, Doležal K (2011) High performance liquid chromatography-electrochemistry- electrospray ionization mass spectrometry (HPLC/EC/ESI-MS) for detection and characterization of roscovitine oxidation products. Electroanalysis 23, 2898-2905; DOI:10.1002/elan.201100383

Petříková K, Neugebauerová J, Dušek K, Dušková E (2011) Metodika pěstování léčivých rostlin: puškvorce obecného, černohlávku obecného a smilu písečného. Certifikovaná metodika pro praxi. Mendelova univerzita v Brně, ISBN 978-80-7375-523-22

Munoz-Amatriaín M, Moscou MJ, Bhat PR, Svensson JT, Bartoš J, Suchánková P, Šimková H, Endo TR, Fenton RD, Lonardi S, Castillo AM, Chao S, Cistué L, Cuesta-Marcos A, Forrest KL, Hayden MJ, Hayes PM, Horsley RD, Makoto K, Moody D, Sato K, Vallés MP, Wulff BBH, Muehlbauer GJ, Doležel J, Close TJ (2011) An improved consensus linkage map of barley based on flow-sorted chromosomes and single nucleotide polymorphism markers. Plant Genome 4, 238-249; DOI:10.3835/plantgenome2011.08.0023

Molnár I, Kubaláková M, Šimková H, Cseh A, Molnár-Láng M, Doležel J (2011) Chromosome isolation by flow sorting inn Aegilops umbellulataaandd Ae. comosaaand their allotetraploid hybridss Ae. biuncialissandd Ae. geniculataa. PLoS One 6(11): e27708; DOI:10.1371/journal.pone.0027708

Cseh A, Kruppa K, Molnár I, Rakszegi M, Doležel J, Molnár-Láng M (2011) Characterization of a new 4BS.7HL wheat-barley translocation line using GISH, FISH, and SSR markers and its effect on the ß-glucan content of wheat. Genome 54, 795-804; DOI:10.1139/G11-044

Mik V, Szüčová L, Spíchal L, Plíhal O, Nisler J, Zahajská L, Doležal K, Strnad M (2011) N9-Substituted NN⁶-[(3-methylbut-2-en-1- yl)amino]purine derivatives and their biological activity in selected cytokinin bioassays. Bioorg. Med. Chem. 19, 7244-7251; DOI: 10.1016/j.bmc.2011.09.052

Vitulo N, Albiero A, Forcato C, Campagna D, Dal Pero F, Bagnaresi P, Colaiacovo M, Faccioli P, Lamontanara A, Šimková H, Kubaláková M, Perrotta G, Facella P, Lopez L, Pietrella M, Gianese G, Doležel J, Giuliano G, Cattivelli L, Valle G, Stanca AM (2011) First survey of the wheat chromosome 5A composition through a next generation sequencing approach. PLoS One 6(10): e26421; DOI: 10.1371/journal.pone.0026421

Parlange F, Oberhaensli S, Breen J, Platzer M, Taudien S, Šimková H, Wicker T, Doležel J, Keller B (2011) A major invasion of transposable elements accounts for the large size of thee Blumeria graminissf.sp.. triticiigenome. Funct. Integr. Genomics 11, 671-677; DOI:10.1007/s10142-011-0240-5

Christelová P, Valárik M, Hřibová E, Van den Houwe I, Channeliére S, Roux N, Doležel J (2011) A platform for efficient genotyping inn Musaausing microsatellite markers. AoB PLANTS 2011 plr024; DOI: 10.1093/aobpla/plr024

Zatloukalová P, Hřibová E, Kubaláková M, Suchánková P, Šimková H, Adoración C, Kahl G, Millán T, Doležel J (2011) Integration of genetic and physical maps of the chickpea ((Cicer arietinum L.))genome using flow-sorted chromosomes. Chromosome Res. 19, 729-739; DOI: 10.1007/s10577-011-9235-2

Berkman PJ, Skarshewski A, Lorenc MT, Lai K, Duran Ch, Ling EYS, Stiller J, Smits L, Imelfort M, Manoli S, McKenzie M,Kubaláková M, Šimková H, Batley J, Fleury D, Doležel J, Edwards D (2011) Sequencing and assembly of low copy and genic regions of isolated /Triticum aestivum/ chromosome arm 7DS. Plant Biotechnol. J. 9, 768-775; DOI: 10.1111/j.1467-7652.2010.00587.x

Reiss K, Meyer-Hoffert U, Fischer J, Sperrhacke M, Wu Z, Dimitrieva O, Křenek P, Suchanova S, Buryova H, Brauer R, Sedlacek R (2011) Expression and regulation of murine SPINK12, a potential orthologue of human LEKTI2. Exp. Dermatol. 20, 905-910; DOI:10.1111/j.1600-0625.2011.01355.x

Pospíšil P (2011) Enzymatic function of cytochrome (2011) Enzymatic function of cytochrome b₅₅₉in photosystem II. J. Photochem. Photobiol. B-Biol. 104, 341-347; DOI: 10.1016/j.jphotobiol.2011.02.013

Prasad A, Pospisil P (2011) Linoleic acid-induced ultra-weak photon emission from Chlamydomonas reinhardtii as a tool for monitoring of lipid peroxidation in the cell membranes. PLoS One 6, e22345; DOI: 10.1371/journal.pone.0022345

Rastogi A, Pospíšil P (2011) Spontaneous ultraweak photon emission imaging of oxidative metabolic processes in human skin: effect of molecular oxygen and antioxidant defense system. J. Biomed. Opt. 16, 096005; DOI: 10.1117/1.3616135

Kyseláková H, Prokopová J, Nauš J, Kyseláková H, Prokopová J, Novák O, Navrátil M, Šafářová D, Špundová M, Ilík P (2011) Photosynthetic alterations of pea leaves infected systemically by pea enation mosaic virus: A coordinated decrease in efficiencies of COO₂assimilation and photosystem II photochemistry. Plant Physiol. Biochem. 49, 1279-1289; DOI: 10.1016/j.plaphy.2011.08.006

Komis G, Illés P, Beck M, Šamaj J (2011) Microtubules and mitogen-activated protein kinase signalling. Curr. Opin. Plant Biol. 14, 650-657; DOI: 10.1016/j.pbi.2011.07.008

Xu C, Zhao L, Pan X, Šamaj J(2011) Developmental Localization and Methylesterification of Pectin Epitopes during Somatic Embryogenesis of Banana (Musa spp. AAA). PLoS One 2011;6(8):e22992; DOI: 10.1371/journal.pone.0022992

Vleeshouwers V, Finkers R, Budding D, Visser M, Jacobs M, van Berloo R, Pel M, Champouret N, Bakker E, Křenek P, Rietman H, Huigen D, Hoekstra R, Goverse A, Vosman B, Jacobsen E, Visser R (2011) SolRgene: an online database to explore disease resistance genes in tuber-bearing Solanum species. BMC Plant Biol. 11, 116; DOI: 10.1186/1471-2229-11-116

Kopečný D, Tylichová M, Snégaroff J, Popelková H, Šebela M (2011) Carboxylate and aromatic active-site residues are determinants of high affinity binding of ?-aminoaldehydes to plant aminoaldehyde dehydrogenases. FEBS J. 278, 3130-3139; DOI: 10.1111/j.1742-4658.2011.08239.x

Kowalska M, Tian T, Šehilová M, Galuszka P, Frébort I, Napier R, Dale N (2011) Prussian Blue acts as a mediator in a reagentless cytokinin biosensor. Anal. Chim. Acta 701, 218-22; DOI: 10.1016/j.aca.2011.06.018

Kryštof V, Rárová L, Liebl J, Zahler S, Jorda R, Voller J, Cankař P (2011) The selective P-TEFb inhibitor CAN508 targets angiogenesis. Eur. J. Med. Chem. 46, 4289-4294; DOI: 10.1016/j.ejmech.2011.06.035

Mahelka V, Kopecký D, Paštová L (2011) On the genome constitution and evolution of intermediate wheatgrass (Thinopyrum intermediumm: Poaceae, Triticeae). BMC Evol. Biol. 11, 127; DOI: 10.1186/1471-2148-11-127

Pan X, Yang X, Lin G, Zou R, Chen H, Šamaj J, Xu C (2011) Ultrastructural changes and the distribution of arabinogalactan proteins during somatic embryogenesis of banana (Musaaspp. AAA cv. 'Yueyoukang 1'). Physiol. Plant. 142, 1399-3054;spp. AAA cv. 'Yueyoukang 1'). Physiol. Plant. 142, 1399-3054; DOI: 10.1111/j.1399-3054.2011.01478.x

Wicker T, Mayer KFX, Gundlach H, Martis M, Steuernagel B, Scholz U, Šimková H, Kubaláková M, Choulet F, Taudien S, Platzer M, Feuillet C, Fahima T, Budak H, Doležel J, Keller B, Stein N (2011) Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives. Plant Cell 23, 1706-1718; DOI: 10.1105/tpc.111.086629

Xie D, Ma L, Šamaj J, Xu C (2011) Immunohistochemical analysis of cell wall hydroxyproline-rich glycoproteins in the roots of resistant and susceptible wax gourd cultivars in response to Fusarium oxysporum f. sp. Benincasae infection and fusaric acid treatment. Plant Cell Reports 30, 1555-1569; DOI: 10.1007/s00299-011-1069-z

Jorda R, Havlíček L, McNae IW, Walkinshaw MD, Voller J, Šturc A, Navrátilová J, Kuzma M, Mistrík M, Bártek J, Strnad M, Kryštof V (2011) Pyrazolo[4,3-d]pyrimidine bioisostere of roscovitine: evaluation of a novel selective inhibitor of cyclin-dependent kinases with antiproliferative activity. J. Med. Chem. 54, 2980-2993; DOI: 10.1021/jm200064p

Maj J, Morzycki JW, Rárová L, Oklešťková J, Strnad M, Wojtkielewicz A (2011) Synthesis and biological activity of 22-deoxo-23-oxa analogues of saponin OSW-1. J. Med. Chem. 54, 3298-3305; DOI: 10.1021/jm101648h

Mrózek L, Dvořáková L, Mandelová Z, Rárová L, Řezáčová A, Plaček L, Opatřilová R, Dohnal J, Král V, Drašar P, Jampílek J (2011) Investigation of new acyloxy derivatives of cholic acid and their esters as drug absorption modifiers. Steroids 76, 1082-1097; DOI: 10.1016/j.steroids.2011.04.014

Doskočilová A, Plíhal O, Volc J, Chumová J, Kourová H, Halada P, Petrovská B, Binarová P (2011) A nodulin/glutamine synthetase-like fusion protein is implicated in the regulation of root morphogenesis and in signalling triggered by flagellin. Planta 234, 459-476; DOI:10.1007/s00425-011-1419-7

Mayer KFX, Martis M, Hedley P E, Šimková H, Liu H, Morris JA, Steuernagel B, Taudien S, Roessner S, Gundlach H, Kubaláková M, Suchánková P, Murat F, Felder M, Nussbaumer T, Graner A, Salse J, Endo TR, Sakai H, Tanaka T, Itoh T, Sato K, Platzer M, Matsumoto T, Scholz U, Doležel J, Waugh R, Stein N (2011) Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell 23, 1249-1263; DOI:10.1105/tpc.110.082537

Christelová P, Valárik M, Hřibová E, De Langhe E, Doležel J (2011) A multi gene sequence-based phylogeny of the Musaceae (banana) family. BMC Evol. Biol. 11, 103; DOI:10.1186/1471-2148-11-103

Hřibová E, Čížková J, Christelová P, Taudien S de Langhe E, Doležel J (2011) The ITS1-5.8S-ITS2 sequence region in the Musaceae: structure, diversity and use in molecular phylogeny. PLoS One 6(3), e17863; DOI: 10.1371/journal.pone.0017863

Bartoš J, Sandve SR, Kölliker R, Kopecký D, Christelová P, Stočes Š, Ostrem L, Larsen A, Kilian A, Rognli O-A, Doležel J (2011) Genetic mapping of DArT markers in the Festuca-Lolium complex and their use in freezing tolerance association analysis. Theor. Appl. Genet. 122, 1133-1147; DOI: 10.1007/s00122-010-1518-z

Mik V, Szüčová L, Šmehilová M, Zatloukal M, Doležal K, Nisler J, Grúz J, Galuszka P, Strnad M, Spíchal L(2011) N9-substituted derivatives of kinetin: Effective anti-senescence agents. Phytochemistry 72, 821-831; DOI: 10.1016/j.phytochem.2011.02.002

Takáč T, Pechan T, Richter H, Müller J, Eck C, Böhm N, Obert B, Ren H, Niehaus K, Šamaj J (2011) Proteomics on brefeldin A-treated Arabidopsis roots reveals profilin 2 as a new protein involved in the cross-talk between vesicular trafficking and the actin cytoskeleton. J. Proteome Res. 10, 488-501; DOI: 10.1021/pr100690f

Beck M, Komis G, Ziemann A, Menzel D, Šamaj J (2011) Mitogen-activated protein kinase 4 is involved in the regulation of mitotic and cytokinetic microtubule transitions inn Arabidopsis thalianaa. New Phytol. 189, 1069-1083; DOI: 10.1111/j.1469-8137.2010.03565.x

Konieczny R, Obert B, Bleho J, Novák O, Heym C, Tuleja M, Müller J, Strnad M, Menzel D, Šamaj J (2011) Stable transformation off Mesembryanthemum crystallinumm(L.) withh Agrobacterium rhizogenessharboring the green fluorescent protein targeted to the endoplasmic reticulum. J. Plant Physiol. 168, 721-729; DOI:10.1016/j.jplph.2010.10.013

Frébort I, Kowalska M, Hluska T, Galuszka P, Frébortová J (2011) Darwin Review. Evolution of cytokinin biosynthesis and degradation. J. Exp. Bot. 62, 2431-2452; DOI: 10.1093/jxb/err004

Chamrád I, Strouhal O, Řehulka P, Lenobel R, Šebela M (2011) Microscale affinity purification of trypsin reduces background peptides in matrix-assisted laser desorption/ionization mass spectrometry of protein digests. J. Proteomics 74, 948-957; DOI: 10.1016/j.jprot.2011.02.01

Xu C, Takáč T, Burbach C, Menzel D, Šamaj J (2011) Developmental localization and the role of hydroxyproline rich glycoproteins during somatic embryogenesis of banana (Musa spp. AAA). BMC Plant Biol. 11, 38; DOI:10.1186/1471-2229-11-38

Takáč T, Pechan T, Šamaj J (2011) Differential proteomics of plant development. J. Proteomics 74, 577-588; DOI:10.1016/j.jprot.2011.02.002

2010

Tarkowski P, Floková K, Václavíková K, Jaworek P, Raus M, Nordstrom A, Novák O, Doležal K, Šebela M, Frébortová J (2010) An improvedd in vivoodeuterium labeling method for measuring the biosynthetic rate of cytokinins. Molecules 15, 9214-9229;DOI:10.3390/molecules15129214

Centre of the Region Haná for Biotechnological and Agricultural Research

Published results